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Svopl Gene Detail
Summary
  • Symbol
    Svopl
  • Name
    SV2 related protein homolog (rat)-like
  • Synonyms
    9430071P14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444335
    NCBI Gene: 320590
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:37983739-38046996 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 17.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    481 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444335
protein coding gene Chr6:37983739-38047009 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030579
protein coding gene Chr6:36249101-36315237 (-)
A/J MGP_AJ_G0030552
protein coding gene Chr6:34687146-34752792 (-)
AKR/J MGP_AKRJ_G0030479
protein coding gene Chr6:35792461-35859501 (-)
BALB/cJ MGP_BALBcJ_G0030562
protein coding gene Chr6:34879006-34942500 (-)
C3H/HeJ MGP_C3HHeJ_G0030275
protein coding gene Chr6:35798393-35863808 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031016
protein coding gene Chr6:37168773-37232941 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028228
protein coding gene Chr6:32602572-32667565 (-)
CAST/EiJ MGP_CASTEiJ_G0029677
protein coding gene Chr6:35682245-35752797 (-)
CBA/J MGP_CBAJ_G0030253
protein coding gene Chr6:38592755-38658959 (-)
DBA/2J MGP_DBA2J_G0030397
protein coding gene Chr6:34508646-34573005 (-)
FVB/NJ MGP_FVBNJ_G0030351
protein coding gene Chr6:34297858-34361167 (-)
LP/J MGP_LPJ_G0030484
protein coding gene Chr6:36311081-36375090 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030387
protein coding gene Chr6:40978395-41041940 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031046
protein coding gene Chr6:35710354-35776205 (-)
PWK/PhJ MGP_PWKPhJ_G0029391
protein coding gene Chr6:34151770-34220620 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029227
protein coding gene Chr6:35431165-35501167 (-)
WSB/EiJ MGP_WSBEiJ_G0029753
protein coding gene Chr6:35657067-35721514 (-)



Homology
more
  • Human Ortholog
    SVOPL, SVOP like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SVOPL, SVOP like
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 136306
    neXtProt AC: NX_Q8N434
    UniProt: Q8N434

  • Chr Location
    7q34; chr7:138591689-138701547 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 52168
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SVOPL
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000029830 Ensembl Gene Model | MGI Sequence Detail 63258 C57BL/6J ±  kb
    transcript ENSMUST00000096040 Ensembl | MGI Sequence Detail 2366 Not Applicable  
    polypeptide ENSMUSP00000093743 Ensembl | MGI Sequence Detail 494 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 10

      Microarray probesets 2
    References
    more
    • Summaries
      All 28
      Developmental Gene Expression 6
      Gene Ontology 2
      Phenotypes 4
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:187047 Gerber SD, et al., Comparison of the gene expression profiles from normal and Fgfrl1 deficient mouse kidneys reveals downstream targets of Fgfrl1 signaling. PLoS One. 2012;7(3):e33457

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    last database update
    11/26/2019
    MGI 6.14
    The Jackson Laboratory