About   Help   FAQ
Idi2 Gene Detail
Summary
  • Symbol
    Idi2
  • Name
    isopentenyl-diphosphate delta isomerase 2
  • Synonyms
    4833405L16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444315
    NCBI Gene: 320581
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:9002899-9010981 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 3.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444315
 protein coding gene Chr13:9002899-9010981 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020220
 protein coding gene Chr13:5574309-5584077 (+)
A/J MGP_AJ_G0020176
 protein coding gene Chr13:5568324-5576154 (+)
AKR/J MGP_AKRJ_G0020151
 protein coding gene Chr13:5623671-5634670 (+)
BALB/cJ MGP_BALBcJ_G0020160
 protein coding gene Chr13:5569019-5578705 (+)
C3H/HeJ MGP_C3HHeJ_G0019963
 protein coding gene Chr13:5753302-5766725 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020606
 protein coding gene Chr13:5922961-5927861 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0019930
 protein coding gene Chr13:6053155-6062088 (+)
DBA/2J MGP_DBA2J_G0020047
 protein coding gene Chr13:5400232-5411066 (+)
FVB/NJ MGP_FVBNJ_G0020032
 protein coding gene Chr13:5259544-5267977 (+)
LP/J MGP_LPJ_G0020122
 protein coding gene Chr13:5687266-5691621 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020068
 protein coding gene Chr13:6364960-6381774 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020635
 protein coding gene Chr13:5583575-5586395 (+)
PWK/PhJ MGP_PWKPhJ_G0019264
 protein coding gene Chr13:5413836-5434724 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019071
 protein coding gene Chr13:5590994-5595090 (+)
WSB/EiJ MGP_WSBEiJ_G0019561
 protein coding gene Chr13:5489711-5499025 (+)



Homology
more
  • Human Ortholog
    IDI2, isopentenyl-diphosphate delta isomerase 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IDI2, isopentenyl-diphosphate delta isomerase 2
  • Synonyms
    IPPI2
  • Links
    NCBI Gene ID: 91734
    neXtProt AC: NX_Q9BXS1
    UniProt: Q9BXS1

  • Chr Location
    10p15.3; chr10:1018910-1025859 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 320581 NCBI Gene Model | MGI Sequence Detail 8083 C57BL/6J ±  kb
transcript NM_177197 RefSeq | MGI Sequence Detail 2253 C57BL/6  
polypeptide Q8BFZ6 UniProt | EBI | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • EC
    5.3.3.2
  • InterPro Domains
    IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1
    IPR000086 NUDIX hydrolase domain
    IPR015797 NUDIX hydrolase-like domain superfamily
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:224387 Sisecioglu M, et al., A compendium of expression patterns of cholesterol biosynthetic enzymes in the mouse embryo. J Lipid Res. 2015 Aug;56(8):1551-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory