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D830050J10Rik Gene Detail
Summary
  • Symbol
    D830050J10Rik
  • Name
    RIKEN cDNA D830050J10 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444203
    NCBI Gene: 352968
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:115675968-115677780 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 53.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444203
lncRNA gene Chr6:115675968-115678367 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004761
bidirectional promoter lncRNA gene Chr6:118312608-118314420 (+)
A/J MGP_AJ_G0004742
bidirectional promoter lncRNA gene Chr6:113767581-113769393 (+)
AKR/J MGP_AKRJ_G0004722
bidirectional promoter lncRNA gene Chr6:116830617-116832423 (+)
BALB/cJ MGP_BALBcJ_G0004724
bidirectional promoter lncRNA gene Chr6:113580847-113582659 (+)
C3H/HeJ MGP_C3HHeJ_G0004670
bidirectional promoter lncRNA gene Chr6:67471877-67473683 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004874
bidirectional promoter lncRNA gene Chr6:121331333-121333145 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004312
bidirectional promoter lncRNA gene Chr6:110777882-110779681 (+)
CAST/EiJ MGP_CASTEiJ_G0004626
bidirectional promoter lncRNA gene Chr6:117189512-117191325 (+)
CBA/J MGP_CBAJ_G0004665
bidirectional promoter lncRNA gene Chr6:126086324-126088130 (+)
DBA/2J MGP_DBA2J_G0004683
bidirectional promoter lncRNA gene Chr6:112696917-112698729 (+)
FVB/NJ MGP_FVBNJ_G0004702
bidirectional promoter lncRNA gene Chr6:111873359-111875170 (+)
LP/J MGP_LPJ_G0004762
bidirectional promoter lncRNA gene Chr6:118326583-118328395 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004687
bidirectional promoter lncRNA gene Chr6:130277235-130279047 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004877
bidirectional promoter lncRNA gene Chr6:116846517-116848329 (+)
PWK/PhJ MGP_PWKPhJ_G0004579
bidirectional promoter lncRNA gene Chr6:111706537-111708342 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004512
bidirectional promoter lncRNA gene Chr6:115561877-115563689 (+)
WSB/EiJ MGP_WSBEiJ_G0004671
bidirectional promoter lncRNA gene Chr6:117109847-117111658 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107994 Ensembl Gene Model | MGI Sequence Detail 1813 C57BL/6J ±  kb
transcript ENSMUST00000203858 Ensembl | MGI Sequence Detail 1813 Not Applicable  
polypeptide Q8C6X7 UniProt | EBI | MGI Sequence Detail 196 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:241559 Ackert-Bicknell CL, et al., A chromosomal inversion within a quantitative trait locus has a major effect on adipogenesis and osteoblastogenesis. Ann N Y Acad Sci. 2007 Nov;1116:291-305

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory