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Cachd1 Gene Detail
Summary
  • Symbol
    Cachd1
  • Name
    cache domain containing 1
  • Synonyms
    1190007F10Rik, B430218L07Rik, Vwcd1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444177
    NCBI Gene: 320508
  • Gene Overview
    MyGene.info: CACHD1
Location & Maps
more
  • Sequence Map
    Chr4:100776675-101029220 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      252546 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 45.76 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CACHD1, cache domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CACHD1, cache domain containing 1
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 57685
    neXtProt AC: NX_Q5VU97

  • Chr Location
    1p31.3; chr1:64470793-64693058 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    2
  • Gene trapped
    6
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Cachd1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008016 VEGA Gene Model | MGI Sequence Detail 252546 C57BL/6J ±  kb
transcript OTTMUST00000018144 VEGA | MGI Sequence Detail 5765 Not Applicable  
polypeptide OTTMUSP00000008332 VEGA | MGI Sequence Detail 1288 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    2045 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000004940 VWFA and cache domain-containing protein 1
  • InterPro Domains
    IPR029151 Periplasmic sensor domain-like
    IPR002035 von Willebrand factor, type A
    IPR013608 VWA N-terminal
Molecular
Reagents
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  • All nucleic 81
    cDNA 81

    Microarray probesets 4
Other
Accession IDs
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MGI:1916110, MGI:2140392
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:203028 Hasenpusch-Theil K, et al., Transcriptional analysis of Gli3 mutants identifies Wnt target genes in the developing hippocampus. Cereb Cortex. 2012 Dec;22(12):2878-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory