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Clec1a Gene Detail
Summary
  • Symbol
    Clec1a
  • Name
    C-type lectin domain family 1, member a
  • Synonyms
    5930406N14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444151
    NCBI Gene: 243653
  • Gene Overview
    MyGene.info: CLEC1A
Location & Maps
more
  • Sequence Map
    Chr6:129424772-129452000 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      27229 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 63.32 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CLEC1A, C-type lectin domain family 1 member A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CLEC1A, C-type lectin domain family 1 member A
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CLEC1, CLEC-1
  • Links
    NCBI Gene ID: 51267
    neXtProt AC: NX_Q8NC01

  • Chr Location
    12p13.2; chr12:10069504-10099065 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Targeted
    4
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000056468 VEGA Gene Model | MGI Sequence Detail 27229 C57BL/6J ±  kb
transcript OTTMUST00000139489 VEGA | MGI Sequence Detail 3123 Not Applicable  
polypeptide OTTMUSP00000073181 VEGA | MGI Sequence Detail 269 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    256 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory