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A830018L16Rik Gene Detail
Summary
  • Symbol
    A830018L16Rik
  • Name
    RIKEN cDNA A830018L16 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444149
    NCBI Gene: 320492
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:11414105-11975901 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 2.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4642 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444149
protein coding gene Chr1:11413563-11975902 (.)
129S1/SvImJ MGP_129S1SvImJ_G0015837
protein coding gene Chr1:8722611-9265730 (+)
A/J MGP_AJ_G0015819
protein coding gene Chr1:8743546-9274578 (+)
AKR/J MGP_AKRJ_G0015778
protein coding gene Chr1:8635658-9178253 (+)
BALB/cJ MGP_BALBcJ_G0015775
protein coding gene Chr1:8474787-8996523 (+)
C3H/HeJ MGP_C3HHeJ_G0015609
protein coding gene Chr1:8565948-9132741 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016229
protein coding gene Chr1:9102429-9705462 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013950
protein coding gene Chr1:7501716-7990463 (+)
CAST/EiJ MGP_CASTEiJ_G0015189
protein coding gene Chr1:8782610-9309294 (+)
CBA/J MGP_CBAJ_G0015582
protein coding gene Chr1:9303316-9926265 (+)
DBA/2J MGP_DBA2J_G0015681
protein coding gene Chr1:8362353-8903185 (+)
FVB/NJ MGP_FVBNJ_G0015686
protein coding gene Chr1:8221383-8737033 (+)
LP/J MGP_LPJ_G0015753
protein coding gene Chr1:8932059-9472349 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015705
protein coding gene Chr1:9952941-10600740 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016276
protein coding gene Chr1:8533243-9067020 (+)
PWK/PhJ MGP_PWKPhJ_G0014973
protein coding gene Chr1:8198633-8717156 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014753
protein coding gene Chr1:8722089-9283636 (+)
WSB/EiJ MGP_WSBEiJ_G0015253
protein coding gene Chr1:8551435-9106500 (+)



Homology
more
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
    Orthology source: HGNC, HomoloGene
  • Synonyms
    VEST1, VEST-1
  • Links
    NCBI Gene ID: 116328
    neXtProt AC: NX_Q49A92
    UniProt: Q49A92

  • Chr Location
    8q13.2; chr8:68330722-68819023 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057715 Ensembl Gene Model | MGI Sequence Detail 561797 C57BL/6J ±  kb
transcript ENSMUST00000137824 Ensembl | MGI Sequence Detail 1880 Not Applicable  
polypeptide ENSMUSP00000117421 Ensembl | MGI Sequence Detail 462 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory