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A830018L16Rik Gene Detail
Summary
  • Symbol
    A830018L16Rik
  • Name
    RIKEN cDNA A830018L16 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444149
    NCBI Gene: 320492
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:11414105-11975901 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 2.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4642 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444149
protein coding gene Chr1:11413615-11975902 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015837
protein coding gene Chr1:8722611-9265730 (+)
A/J MGP_AJ_G0015819
protein coding gene Chr1:8743546-9274578 (+)
AKR/J MGP_AKRJ_G0015778
protein coding gene Chr1:8635658-9178253 (+)
BALB/cJ MGP_BALBcJ_G0015775
protein coding gene Chr1:8474787-8996523 (+)
C3H/HeJ MGP_C3HHeJ_G0015609
protein coding gene Chr1:8565948-9132741 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016229
protein coding gene Chr1:9102429-9705462 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013950
protein coding gene Chr1:7501716-7990463 (+)
CAST/EiJ MGP_CASTEiJ_G0015189
protein coding gene Chr1:8782610-9309294 (+)
CBA/J MGP_CBAJ_G0015582
protein coding gene Chr1:9303316-9926265 (+)
DBA/2J MGP_DBA2J_G0015681
protein coding gene Chr1:8362353-8903185 (+)
FVB/NJ MGP_FVBNJ_G0015686
protein coding gene Chr1:8221383-8737033 (+)
LP/J MGP_LPJ_G0015753
protein coding gene Chr1:8932059-9472349 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015705
protein coding gene Chr1:9952941-10600740 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016276
protein coding gene Chr1:8533243-9067020 (+)
PWK/PhJ MGP_PWKPhJ_G0014973
protein coding gene Chr1:8198633-8717156 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014753
protein coding gene Chr1:8722089-9283636 (+)
WSB/EiJ MGP_WSBEiJ_G0015253
protein coding gene Chr1:8551435-9106500 (+)



Homology
more
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C8orf34, chromosome 8 open reading frame 34
    Orthology source: HomoloGene, HGNC
  • Synonyms
    VEST1, VEST-1
  • Links
    NCBI Gene ID: 116328
    neXtProt AC: NX_Q49A92
    UniProt: Q49A92

  • Chr Location
    8q13.2; chr8:68330722-68819023 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057715 Ensembl Gene Model | MGI Sequence Detail 561797 C57BL/6J ±  kb
transcript ENSMUST00000137824 Ensembl | MGI Sequence Detail 1880 Not Applicable  
polypeptide ENSMUSP00000117421 Ensembl | MGI Sequence Detail 462 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR040687 Protein of unknown function DUF5586
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/12/2021
MGI 6.16
The Jackson Laboratory