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A430078I02Rik Gene Detail
Summary
  • Symbol
    A430078I02Rik
  • Name
    RIKEN cDNA A430078I02 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444132
    NCBI Gene: 320486
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:86470277-86480830 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 37.70 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    95 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444132
lncRNA gene Chr6:86470277-86480830 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004307
antisense lncRNA gene Chr6:87757926-87768475 (-)
A/J MGP_AJ_G0004285
antisense lncRNA gene Chr6:84373023-84383575 (-)
AKR/J MGP_AKRJ_G0004267
antisense lncRNA gene Chr6:86819697-86830249 (-)
BALB/cJ MGP_BALBcJ_G0004271
antisense lncRNA gene Chr6:84380026-84391086 (-)
C3H/HeJ MGP_C3HHeJ_G0004234
antisense lncRNA gene Chr6:97638052-97648606 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004420
antisense lncRNA gene Chr6:90142076-90152629 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004181
antisense lncRNA gene Chr6:86885791-86896321 (-)
CBA/J MGP_CBAJ_G0004213
antisense lncRNA gene Chr6:93686267-93696819 (-)
DBA/2J MGP_DBA2J_G0004229
antisense lncRNA gene Chr6:83690462-83701015 (-)
FVB/NJ MGP_FVBNJ_G0004245
antisense lncRNA gene Chr6:82873916-82884526 (-)
LP/J MGP_LPJ_G0004308
antisense lncRNA gene Chr6:87797985-87808539 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0004236
antisense lncRNA gene Chr6:97811052-97822424 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004418
antisense lncRNA gene Chr6:86657896-86668448 (-)
PWK/PhJ MGP_PWKPhJ_G0004134
antisense lncRNA gene Chr6:82632906-82643565 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004077
antisense lncRNA gene Chr6:85496682-85507355 (-)
WSB/EiJ MGP_WSBEiJ_G0004218
antisense lncRNA gene Chr6:87112397-87122949 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 320486 NCBI Gene Model | MGI Sequence Detail 10554 C57BL/6J ±  kb
transcript NR_131125 RefSeq | MGI Sequence Detail 2761 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
Other
Accession IDs
less
MGI:2141798
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory