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Slc1a7
Gene Detail
 Symbol
Name
ID
Slc1a7
solute carrier family 1 (glutamate transporter), member 7
MGI:2444087
Synonyms A930031E15Rik, EAAT5
Feature Type protein coding gene
Genetic Map
Chromosome 4
50.18 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:107968332-108013532 bp, + strand
From VEGA annotation of GRCm38

  45201 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:21327  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: glutamate/aspartate transport protein
Gene Tree: Slc1a7

Human
homologs
Human Homolog SLC1A7, solute carrier family 1 (glutamate transporter), member 7
NCBI Gene ID 6512
neXtProt AC  NX_O00341
Human Synonyms  AAAT, EAAT5
Human Chr (Location)  1p32.3; chr1:53087179-53142632 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc1a7 interacts with 170 markers (Mir1a-1, Mir1a-2, Mir23a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process dicarboxylic acid transport, transport
Component integral component of membrane, membrane
Function sodium:dicarboxylate symporter activity, symporter activity
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (12)    Tissues (8)    Images (8)
Theiler Stages: 23, 24, 27, 28
Assay TypeResults
RNA in situ 12
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(11) Other(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000009321 (Evidence)
Ensembl Gene ModelENSMUSG00000008932 (Evidence)
Entrez Gene242607 (Evidence)
UniGene192040
DFCITC1586777, TC1596501
DoTSDT.101270505, DT.110824659, DT.91335698
NIA Mouse Gene IndexU004613
Consensus CDS ProjectCCDS18444.2
International Mouse Knockout Project StatusSlc1a7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009321 VEGA Gene Model | MGI Sequence Detail 45201 C57BL/6J ±  kb
transcript OTTMUST00000021186 VEGA | MGI Sequence Detail 3007 Not Applicable 
polypeptide OTTMUSP00000009694 VEGA | MGI Sequence Detail 569 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(8) UniProt(3)
Polymorphisms SNPs within 2kb(449 from dbSNP Build 137)    SNPs within 2kb including multiple locations(451)
Protein-related
information
ResourceIDDescription
InterPro IPR001991 Sodium:dicarboxylate symporter
InterPro IPR018107 Sodium:dicarboxylate symporter, conserved site
Protein Ontology PR:000014978 excitatory amino acid transporter 5
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory