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Glyctk Gene Detail
Summary
  • Symbol
    Glyctk
  • Name
    glycerate kinase
  • Synonyms
    6230410P16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444085
    NCBI Gene: 235582
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:106030056-106035337 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 57.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444085
 protein coding gene Chr9:106030056-106037353 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035220
 protein coding gene Chr9:107932107-107937419 (-)
A/J MGP_AJ_G0035200
 protein coding gene Chr9:104046998-104052309 (-)
AKR/J MGP_AKRJ_G0035132
 protein coding gene Chr9:106634800-106640111 (-)
BALB/cJ MGP_BALBcJ_G0035193
 protein coding gene Chr9:103730641-103735755 (-)
C3H/HeJ MGP_C3HHeJ_G0034903
 protein coding gene Chr9:107043946-107049257 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035713
 protein coding gene Chr9:110897722-110902833 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032611
 protein coding gene Chr9:101542201-101547425 (-)
CAST/EiJ MGP_CASTEiJ_G0034215
 protein coding gene Chr9:106929964-106935257 (-)
CBA/J MGP_CBAJ_G0034872
 protein coding gene Chr9:114788365-114793245 (-)
DBA/2J MGP_DBA2J_G0035033
 protein coding gene Chr9:103508399-103513517 (-)
FVB/NJ MGP_FVBNJ_G0034981
 protein coding gene Chr9:102274302-102279622 (-)
LP/J MGP_LPJ_G0035109
 protein coding gene Chr9:108155013-108160325 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035020
 protein coding gene Chr9:116448169-116453480 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035735
 protein coding gene Chr9:106868134-106873449 (-)
PWK/PhJ MGP_PWKPhJ_G0033922
 protein coding gene Chr9:103799876-103805156 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033757
 protein coding gene Chr9:106932591-106937791 (-)
WSB/EiJ MGP_WSBEiJ_G0034335
 protein coding gene Chr9:106776084-106781396 (-)



Homology
more
  • Human Ortholog
    GLYCTK, glycerate kinase
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GLYCTK, glycerate kinase
  • Synonyms
    HBeAgBP4A, HBEBP2, HBEBP4
  • Links
    NCBI Gene ID: 132158
    neXtProt AC: NX_Q8IVS8
    UniProt: Q8IVS8

  • Chr Location
    3p21.2; chr3:52287089-52295257 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human GLYCTK associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    892
  • Tissues
    166
  • cDNA Data
    13
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020258 Ensembl Gene Model | MGI Sequence Detail 5282 C57BL/6J ±  kb
    transcript ENSMUST00000112543 Ensembl | MGI Sequence Detail 4081 Not Applicable  
    polypeptide ENSMUSP00000108162 Ensembl | MGI Sequence Detail 523 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 14
      cDNA 14

      Microarray probesets 3
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 5
      Gene Ontology 8
      Phenotypes 4
    • Earliest
      J:322156 Katayama H, et al., Purification of rat liver glycerate kinase and studies of its enzymatic and immunological properties. J Biochem. 1980 Sep;88(3):765-73
    • Latest
      J:322157 Sass JO, et al., d-Glycerate kinase deficiency in a neuropediatric patient. Brain Dev. 2020 Feb;42(2):226-230
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory