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Glyctk
Gene Detail
Symbol

Name
ID
Glyctk
glycerate kinase
MGI:2444085
Synonyms
6230410P16Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
57.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:106152857-106158138 bp, - strand
From VEGA annotation of GRCm38

  5282 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14738  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: GLYCTK
Gene Tree: Glyctk

Human
homologs
GLYCTK, glycerate kinase
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 132158
neXtProt AC: NX_Q8IVS8

Human Synonyms: HBeAgBP4A, HBEBP2, HBEBP4

Human Chr (Location): 3p21.1; chr3:52287820-52295256 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human GLYCTK

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Glyctk interacts with 258 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process phosphorylation, protein phosphorylation
Component cytoplasm, mitochondrion
Function ATP binding, glycerate kinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (186)    Tissues (166)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 186
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase glyctk    NEW 
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000034701 (Evidence)
Ensembl Gene Model ENSMUSG00000020258 (Evidence)
Entrez Gene 235582 (Evidence)
NIA Mouse Gene Index U031287
EC 2.7.1.31
Consensus CDS Project CCDS23469.1
International Mouse Phenotyping Consortium Status Glyctk
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034701 VEGA Gene Model | MGI Sequence Detail 5282 C57BL/6J ±  kb
transcript OTTMUST00000088124 VEGA | MGI Sequence Detail 4209 Not Applicable 
polypeptide OTTMUSP00000048015 VEGA | MGI Sequence Detail 523 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(10) UniProt(4)
Polymorphisms
SNPs within 2kb(80 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR025286 Domain of unknown function DUF4147
InterPro IPR007835 MOFRL domain
Protein Ontology PR:000008063 glycerate kinase
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory