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Glyctk
Gene Detail
Symbol

Name
ID
Glyctk
glycerate kinase
MGI:2444085
Synonyms
6230410P16Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
57.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:106152857-106158138 bp, - strand
From VEGA annotation of GRCm38

  5282 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14738  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Glyctk

Human
homologs
Human Homolog GLYCTK, glycerate kinase
NCBI Gene ID 132158
neXtProt AC  NX_Q8IVS8
Human Synonyms  HBeAgBP4A, HBEBP2, HBEBP4
Human Chr (Location)  3p21.1; chr3:52287820-52295256 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human GLYCTK
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Glyctk interacts with 259 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process phosphorylation, protein phosphorylation
Component cytoplasm, mitochondrion
Function ATP binding, glycerate kinase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (186)    Tissues (166)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 186
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000034701 (Evidence)
Ensembl Gene ModelENSMUSG00000020258 (Evidence)
Entrez Gene235582 (Evidence)
NIA Mouse Gene IndexU031287
EC2.7.1.31
Consensus CDS ProjectCCDS23469.1
International Mouse Knockout Project StatusGlyctk
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034701 VEGA Gene Model | MGI Sequence Detail 5282 C57BL/6J ±  kb
transcript OTTMUST00000088124 VEGA | MGI Sequence Detail 4209 Not Applicable 
polypeptide OTTMUSP00000048015 VEGA | MGI Sequence Detail 523 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(8) UniProt(7)
Polymorphisms
SNPs within 2kb(80 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR025286 Domain of unknown function DUF4147
InterPro IPR007835 MOFRL domain
Protein Ontology PR:000008063 glycerate kinase
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory