Vwc2l
Gene Detail

Symbol Name ID

Vwc2l von Willebrand factor C domain-containing protein 2-like MGI:2444069

Synonyms

A830006F12Rik, Brl, brorin-like

Feature Type

protein coding gene

Genetic Map

Chromosome 1

35.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr1:70725715-70885397 bp, + strand From VEGA annotation of GRCm38   159683 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:27945  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Vwc2l

Human homologs

Human Homolog		VWC2L, von Willebrand factor C domain containing protein 2-like
NCBI Gene ID		402117
neXtProt AC		NX_B2RUY7
Human Chr (Location)		2q34-q35; chr2:215276461-215440653 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (9 annotations)

Process	multicellular organismal development, negative regulation of BMP signaling pathway, ...
Component	alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex, cell junction, ...
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (23)    Tissues (16)   
Theiler Stages: 20, 22, 24, 26, 28

Assay Type	Results
RNA in situ	14
RT-PCR	9

cDNA source data(11)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(12) cDNA(11) Primer pair(1)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000026625 (Evidence)
Ensembl Gene Model	ENSMUSG00000045648 (Evidence)
Entrez Gene	320460 (Evidence)
UniGene	360649
DFCI	TC1595129, TC1601429, TC1687459
DoTS	DT.110911347, DT.55228015, DT.94222979, DT.97406617
NIA Mouse Gene Index	U000414
Consensus CDS Project	CCDS15028.1
International Mouse Knockout Project Status	Vwc2l

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026625	VEGA Gene Model | MGI Sequence Detail	159683	C57BL/6J
transcript	OTTMUST00000065892	VEGA | MGI Sequence Detail	4655	Not Applicable
polypeptide	OTTMUSP00000032899	VEGA | MGI Sequence Detail	222	Not Applicable

All sequences(38) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(771 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001007	von Willebrand factor, type C
Protein Ontology	PR:000031454	von Willebrand factor C domain-containing protein 2-like

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:188364 Schwenk J, et al., High-resolution proteomics unravel architecture and molecular diversity of native AMPA receptor complexes. Neuron. 2012 May 24;74(4):621-33
All references(25)