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Pqlc3 Gene Detail
Summary
  • Symbol
    Pqlc3
  • Name
    PQ loop repeat containing
  • Synonyms
    E030024M05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444067
    NCBI Gene: 217430
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:16988648-17000386 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 8.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444067
protein coding gene Chr12:16988648-17000408 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019614
protein coding gene Chr12:14395536-14408302 (-)
A/J MGP_AJ_G0019581
protein coding gene Chr12:13895027-13906774 (-)
AKR/J MGP_AKRJ_G0019551
protein coding gene Chr12:14548988-14560719 (-)
BALB/cJ MGP_BALBcJ_G0019557
protein coding gene Chr12:14140348-14152095 (-)
C3H/HeJ MGP_C3HHeJ_G0019362
protein coding gene Chr12:14460804-14472556 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020005
protein coding gene Chr12:14882654-14894976 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017631
protein coding gene Chr12:13400349-13412331 (-)
CAST/EiJ MGP_CASTEiJ_G0018917
protein coding gene Chr12:14344399-14356125 (-)
CBA/J MGP_CBAJ_G0019333
protein coding gene Chr12:15682146-15696395 (-)
DBA/2J MGP_DBA2J_G0019446
protein coding gene Chr12:13812045-13823843 (-)
FVB/NJ MGP_FVBNJ_G0019437
protein coding gene Chr12:13699557-13711264 (-)
LP/J MGP_LPJ_G0019517
protein coding gene Chr12:14515623-14527382 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019472
protein coding gene Chr12:15568499-15582127 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020044
protein coding gene Chr12:14237753-14249485 (-)
PWK/PhJ MGP_PWKPhJ_G0018683
protein coding gene Chr12:13849189-13861310 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018473
protein coding gene Chr12:14448038-14458346 (-)
WSB/EiJ MGP_WSBEiJ_G0018968
protein coding gene Chr12:14359240-14370957 (-)



Homology
more
  • Human Ortholog
    SLC66A3, solute carrier family 66 member 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC66A3, solute carrier family 66 member 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C2orf22, PQLC3
  • Links
    NCBI Gene ID: 130814
    neXtProt AC: NX_Q8N755
    UniProt: Q8N755

  • Chr Location
    2p25.1; chr2:11155372-11178874 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 217430 NCBI Gene Model | MGI Sequence Detail 11739 C57BL/6J ±  kb
transcript NM_172574 RefSeq | MGI Sequence Detail 1928 C57BL/6  
polypeptide Q8C6U2 UniProt | EBI | MGI Sequence Detail 202 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145089
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:221155 Quintens R, et al., Identification of novel radiation-induced p53-dependent transcripts extensively regulated during mouse brain development. Biol Open. 2015;4(3):331-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory