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Foxd2os Gene Detail
Summary
  • Symbol
    Foxd2os
  • Name
    forkhead box D2, opposite strand
  • Synonyms
    9130206I24Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444065
    NCBI Gene: 100040736
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:114766454-114778315 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 52.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444065
lncRNA gene Chr4:114766454-114779164 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015568
unclassified non-coding RNA gene Chr4:115665971-115681206 (+)
A/J MGP_AJ_G0015545
unclassified non-coding RNA gene Chr4:111252126-111265759 (+)
AKR/J MGP_AKRJ_G0015509
unclassified non-coding RNA gene Chr4:113555039-113569758 (+)
BALB/cJ MGP_BALBcJ_G0015507
unclassified non-coding RNA gene Chr4:111893913-111907526 (+)
C3H/HeJ MGP_C3HHeJ_G0015329
unclassified non-coding RNA gene Chr4:115171458-115184564 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015960
unclassified non-coding RNA gene Chr4:120142296-120157394 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013696
unclassified non-coding RNA gene Chr4:105353859-105366222 (+)
CAST/EiJ MGP_CASTEiJ_G0014884
unclassified non-coding RNA gene Chr4:112591390-112603696 (+)
CBA/J MGP_CBAJ_G0015310
unclassified non-coding RNA gene Chr4:123249661-123262300 (+)
DBA/2J MGP_DBA2J_G0015404
unclassified non-coding RNA gene Chr4:111900601-111913471 (+)
FVB/NJ MGP_FVBNJ_G0015411
unclassified non-coding RNA gene Chr4:110367121-110383673 (+)
LP/J MGP_LPJ_G0015484
unclassified non-coding RNA gene Chr4:115872224-115884919 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015434
unclassified non-coding RNA gene Chr4:128400615-128414255 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016002
unclassified non-coding RNA gene Chr4:114800461-114816119 (+)
PWK/PhJ MGP_PWKPhJ_G0014669
unclassified non-coding RNA gene Chr4:108686676-108699443 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014458
unclassified non-coding RNA gene Chr4:111191396-111203689 (+)
WSB/EiJ MGP_WSBEiJ_G0014989
unclassified non-coding RNA gene Chr4:114586314-114600304 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Foxd2os
  • Find Mice (IMSR)
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 100040736 NCBI Gene Model | MGI Sequence Detail 11862 C57BL/6J ±  kb
transcript NR_030721 RefSeq | MGI Sequence Detail 2908 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:272619 Aydogdu N, et al., TBX2 and TBX3 act downstream of canonical WNT signaling in patterning and differentiation of the mouse ureteric mesenchyme. Development. 2018 Nov 26;145(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/30/2021
MGI 6.17
The Jackson Laboratory