Athl1
Gene Detail

Symbol Name ID

Athl1 ATH1, acid trehalase-like 1 (yeast) MGI:2444047

Synonyms

5730511L01Rik, MGC:28193

Feature Type

protein coding gene

Genetic Map

Chromosome 7

86.16 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr7:140941391-140947664 bp, + strand From VEGA annotation of GRCm38   6274 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:16023  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase
Gene Tree: Athl1

Human homologs

Human Homolog		ATHL1, ATH1, acid trehalase-like 1 (yeast)
NCBI Gene ID		80162
neXtProt AC		NX_Q32M88
Human Chr (Location)		11p15.5; chr11:289138-295688 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(4) : Targeted(2) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (6 annotations)

Process	carbohydrate metabolic process, metabolic process
Component	cellular_component
Function	catalytic activity, hydrolase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (106)    Tissues (102)    Images (9)
Theiler Stages: 22, 24, 26, 28

Assay Type	Results
RNA in situ	106

cDNA source data(43)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(44) cDNA(44)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000036788 (Evidence)
Ensembl Gene Model	ENSMUSG00000062031 (Evidence)
Entrez Gene	212974 (Evidence)
UniGene	260139
DFCI	TC1577108, TC1777058
DoTS	DT.101734766, DT.110988329, DT.94188676, DT.97411311
NIA Mouse Gene Index	U008941
EC	3.2.1.-
Consensus CDS Project	CCDS21992.1
International Mouse Knockout Project Status	Athl1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000036788	VEGA Gene Model | MGI Sequence Detail	6274	C57BL/6J
transcript	OTTMUST00000094419	VEGA | MGI Sequence Detail	2981	Not Applicable
polypeptide	OTTMUSP00000052501	VEGA | MGI Sequence Detail	690	Not Applicable

All sequences(50) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(47 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR005195	Glycoside hydrolase, family 65, central catalytic
InterPro	IPR012341	Six-hairpin glycosidase
InterPro	IPR008928	Six-hairpin glycosidase-like
Protein Ontology	PR:000004422	acid trehalase-like protein 1

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)