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Catsperb Gene Detail
Summary
  • Symbol
    Catsperb
  • Name
    catsper channel auxiliary subunit beta
  • Synonyms
    4932415G16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443988
    NCBI Gene: 271036
Location & Maps
more
  • Sequence Map
    Chr12:101404673-101626009 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      221337 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 51.23 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CATSPERB, cation channel sperm associated auxiliary subunit beta
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CATSPERB, cation channel sperm associated auxiliary subunit beta
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf161, CatSper(beta)
  • Links
    NCBI Gene ID: 79820
    neXtProt AC: NX_Q9H7T0

  • Chr Location
    14q32.12; chr14:91580774-91732086 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Catsperb
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000047014 Ensembl Gene Model | MGI Sequence Detail 221337 C57BL/6J ±  kb
transcript ENSMUST00000055156 Ensembl | MGI Sequence Detail 3716 Not Applicable  
polypeptide ENSMUSP00000052089 Ensembl | MGI Sequence Detail 1109 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    1286 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000000672 cation channel sperm-associated protein subunit beta
  • InterPro Domains
    IPR028748 Cation channel sperm-associated protein subunit beta
Molecular
Reagents
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  • All nucleic 10
    cDNA 8
    Primer pair 1
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:182472 Chung JJ, et al., A novel gene required for male fertility and functional CATSPER channel formation in spermatozoa. Nat Commun. 2011 Jan 11;2:153

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory