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Amdhd2 Gene Detail
Summary
  • Symbol
    Amdhd2
  • Name
    amidohydrolase domain containing 2
  • Synonyms
    5730457F11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443978
    NCBI Gene: 245847
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:24155833-24163733 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 12.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443978
protein coding gene Chr17:24155833-24163766 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023289
protein coding gene Chr17:23108619-23117833 (-)
A/J MGP_AJ_G0023249
protein coding gene Chr17:22508677-22516645 (-)
AKR/J MGP_AKRJ_G0023216
protein coding gene Chr17:22570257-22578097 (-)
BALB/cJ MGP_BALBcJ_G0023254
protein coding gene Chr17:22683707-22693366 (-)
C3H/HeJ MGP_C3HHeJ_G0023014
protein coding gene Chr17:22905090-22913666 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023697
protein coding gene Chr17:24152292-24161638 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021174
protein coding gene Chr17:19967635-19976045 (-)
CAST/EiJ MGP_CASTEiJ_G0022516
protein coding gene Chr17:22748545-22756509 (-)
CBA/J MGP_CBAJ_G0022990
protein coding gene Chr17:24980764-24989489 (-)
DBA/2J MGP_DBA2J_G0023119
protein coding gene Chr17:22082260-22090228 (-)
FVB/NJ MGP_FVBNJ_G0023089
protein coding gene Chr17:21797966-21806414 (-)
LP/J MGP_LPJ_G0023196
protein coding gene Chr17:23426081-23434049 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023108
protein coding gene Chr17:24699187-24708123 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023735
protein coding gene Chr17:22837472-22846294 (-)
PWK/PhJ MGP_PWKPhJ_G0022265
protein coding gene Chr17:20838785-20846897 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022084
protein coding gene Chr17:20863247-20871380 (-)
WSB/EiJ MGP_WSBEiJ_G0022579
protein coding gene Chr17:22897118-22911120 (-)



Homology
more
  • Human Ortholog
    AMDHD2, amidohydrolase domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    AMDHD2, amidohydrolase domain containing 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CGI-14
  • Links
    NCBI Gene ID: 51005
    neXtProt AC: NX_Q9Y303
    UniProt: Q9Y303

  • Chr Location
    16p13.3; chr16:2520351-2531414 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 245847 NCBI Gene Model | MGI Sequence Detail 7901 C57BL/6J ±  kb
transcript NM_172935 RefSeq | MGI Sequence Detail 1463 C57BL/6  
polypeptide Q8JZV7 UniProt | EBI | MGI Sequence Detail 409 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 47
    cDNA 47

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:188842 Bergfeld AK, et al., Metabolism of vertebrate amino sugars with N-glycolyl groups: elucidating the intracellular fate of the non-human sialic acid N-glycolylneuraminic acid. J Biol Chem. 2012 Aug 17;287(34):28865-81

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/15/2020
MGI 6.15
The Jackson Laboratory