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Dpy19l3
Gene Detail
Symbol

Name
ID
Dpy19l3
dpy-19-like 3 (C. elegans)
MGI:2443952
Synonyms
9330164H19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
21.37 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:35685165-35754454 bp, - strand
From VEGA annotation of GRCm38

  69290 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18692  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: DPY19L3
Gene Tree: Dpy19l3

Human
homologs
DPY19L3, dpy-19-like 3 (C. elegans)
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 147991
neXtProt AC: NX_Q6ZPD9

Human Chr (Location): 19q13.11; chr19:32405749-32485893 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(3) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Dpy19l3 interacts with 416 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Expression
Literature Summary: (1 records)
cDNA source data(64)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase dpy19l3    NEW 
Molecular
reagents
All nucleic(64) cDNA(64)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000030802 (Evidence)
Ensembl Gene Model ENSMUSG00000043671 (Evidence)
Entrez Gene 233115 (Evidence)
UniGene 257808
DFCI TC1578360, TC1622682, TC1624479, TC1644933
DoTS DT.101163592, DT.101319305, DT.91354797
NIA Mouse Gene Index U028442
EC 2.4.1.-
Consensus CDS Project CCDS21155.1
International Mouse Phenotyping Consortium Status Dpy19l3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030802 VEGA Gene Model | MGI Sequence Detail 69290 C57BL/6J ±  kb
transcript OTTMUST00000076220 VEGA | MGI Sequence Detail 8006 Not Applicable 
polypeptide OTTMUSP00000040098 VEGA | MGI Sequence Detail 716 Not Applicable 

For the selected sequences
All sequences(55) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(486 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018732 Dpy-19
Protein Ontology PR:000006675 protein dpy-19 3
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:181003 Watanabe K, et al., Dpy19l1, a multi-transmembrane protein, regulates the radial migration of glutamatergic neurons in the developing cerebral cortex. Development. 2011 Nov;138(22):4979-90
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory