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Cenpt
Gene Detail
Symbol

Name
ID
Cenpt
centromere protein T
MGI:2443939
Synonyms
G630055P03Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 8
53.05 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:105844678-105852008 bp, - strand
From Ensembl annotation of GRCm38

  7331 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41610  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog

Gene Tree: Cenpt

Human
homologs
Human Homolog CENPT, centromere protein T
NCBI Gene ID 80152
neXtProt AC  NX_Q96BT3
Human Synonyms  C16orf56, CENP-T
Human Chr (Location)  16q22.1; chr16:67828157-67847458 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(24) : Gene trapped(22) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cenpt interacts with 33 markers (Mir15b, Mir26a-1, Mir33, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process cell cycle, cell division, ...
Component chromosome, chromosome, centromeric region, ...
Function DNA binding, protein heterodimerization activity
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (21)    Tissues (17)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 11
RT-PCR 10
cDNA source data(75)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(77) cDNA(76) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000036672 (Evidence)
Entrez Gene320394 (Evidence)
UniGene334775
DFCITC1611294, TC1684022, TC1576634, TC1710992, TC1710192
NIA Mouse Gene IndexU030186
Consensus CDS ProjectCCDS22615.1
International Mouse Knockout Project StatusCenpt
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036672 Ensembl Gene Model | MGI Sequence Detail 7331 C57BL/6J ±  kb
transcript ENSMUST00000040776 Ensembl | MGI Sequence Detail 1767 Not Applicable 
polypeptide ENSMUSP00000038188 Ensembl | MGI Sequence Detail 515 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(14) UniProt(1)
Polymorphisms
SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009072 Histone-fold
Protein Ontology PR:000005338 centromere protein T
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:193641 Nakano Y, et al., A mutation in the Srrm4 gene causes alternative splicing defects and deafness in the Bronx waltzer mouse. PLoS Genet. 2012;8(10):e1002966
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory