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Thsd7b Gene Detail
Summary
  • Symbol
    Thsd7b
  • Name
    thrombospondin, type I, domain containing 7B
  • Synonyms
    1700074E13Rik, D130067I03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443925
    NCBI Gene: 210417
Location & Maps
more
  • Sequence Map
    Chr1:129273302-130219278 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      945977 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 56.55 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    THSD7B, thrombospondin type 1 domain containing 7B
  • Vertebrate Orthologs
    9
  • Human Ortholog
    THSD7B, thrombospondin type 1 domain containing 7B
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 80731
    neXtProt AC: NX_Q9C0I4

  • Chr Location
    2q22.1; chr2:136765562-137677717 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    3 involving Thsd7b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026224 VEGA Gene Model | MGI Sequence Detail 945977 C57BL/6J ±  kb
transcript OTTMUST00000064853 VEGA | MGI Sequence Detail 6213 Not Applicable  
polypeptide OTTMUSP00000032246 VEGA | MGI Sequence Detail 1607 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    5393 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000032684 thrombospondin type-1 domain-containing protein 7B
  • InterPro Domains
    IPR000884 Thrombospondin type-1 (TSP1) repeat
Molecular
Reagents
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  • All nucleic 22
    cDNA 21
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
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MGI:1925716
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory