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6720489N17Rik Gene Detail
Summary
  • Symbol
    6720489N17Rik
  • Name
    RIKEN cDNA 6720489N17 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443901
    NCBI Gene: 211378
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:62603013-62624182 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 32.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    60 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443901
protein coding gene Chr13:62598066-62638257 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0020616
protein coding gene Chr13:60608294-60610605 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0021050
protein coding gene Chr13:64514357-64597773 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0020496
protein coding gene Chr13:59040437-59042731 (+)
FVB/NJ MGP_FVBNJ_G0020474
protein coding gene Chr13:59190663-59193030 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020504
protein coding gene Chr13:65991274-65993839 (-)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0019681
protein coding gene Chr13:59844896-59849000 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072066 Ensembl Gene Model | MGI Sequence Detail 21170 C57BL/6J ±  kb
transcript ENSMUST00000223338 Ensembl | MGI Sequence Detail 1457 Not Applicable  
polypeptide ENSMUSP00000152670 Ensembl | MGI Sequence Detail 127 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR036051 KRAB domain superfamily
    IPR001909 Krueppel-associated box
    IPR039938 Zinc finger protein 781
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/23/2021
MGI 6.16
The Jackson Laboratory