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6720489N17Rik Gene Detail
Summary
  • Symbol
    6720489N17Rik
  • Name
    RIKEN cDNA 6720489N17 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443901
    NCBI Gene: 211378
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:62603013-62624182 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 32.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    60 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443901
protein coding gene Chr13:62598066-62638257 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0020616
protein coding gene Chr13:60608294-60610605 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0021050
protein coding gene Chr13:64514357-64597773 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0020496
protein coding gene Chr13:59040437-59042731 (+)
FVB/NJ MGP_FVBNJ_G0020474
protein coding gene Chr13:59190663-59193030 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020504
protein coding gene Chr13:65991274-65993839 (-)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0019681
protein coding gene Chr13:59844896-59849000 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072066 Ensembl Gene Model | MGI Sequence Detail 21170 C57BL/6J ±  kb
transcript ENSMUST00000223338 Ensembl | MGI Sequence Detail 1457 Not Applicable  
polypeptide ENSMUSP00000152670 Ensembl | MGI Sequence Detail 127 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR036051 KRAB domain superfamily
    IPR001909 Krueppel-associated box
    IPR039938 Zinc finger protein 781
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory