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Samd10 Gene Detail
Summary
  • Symbol
    Samd10
  • Name
    sterile alpha motif domain containing 10
  • Synonyms
    D930033N23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443872
    NCBI Gene: 229011
Location & Maps
more
  • Sequence Map
    Chr2:181595218-181599212 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3995 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 103.67 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SAMD10, sterile alpha motif domain containing 10
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SAMD10, sterile alpha motif domain containing 10
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C20orf136, dJ591C20, dJ591C20.7
  • Links
    NCBI Gene ID: 140700
    neXtProt AC: NX_Q9BYL1

  • Chr Location
    20q13.33; chr20:63974113-63980986 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    3
  • Gene trapped
    3
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016736 VEGA Gene Model | MGI Sequence Detail 3995 C57BL/6J ±  kb
transcript OTTMUST00000040561 VEGA | MGI Sequence Detail 2164 Not Applicable  
polypeptide OTTMUSP00000018130 VEGA | MGI Sequence Detail 202 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    5 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000031264 sterile alpha motif domain-containing protein 10
  • InterPro Domains
    IPR001660 Sterile alpha motif domain
    IPR013761 Sterile alpha motif/pointed domain
Molecular
Reagents
less
  • All nucleic 34
    cDNA 34

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory