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Samd10 Gene Detail
Summary
  • Symbol
    Samd10
  • Name
    sterile alpha motif domain containing 10
  • Synonyms
    D930033N23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443872
    NCBI Gene: 229011
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:181595218-181599212 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 103.67 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443872
protein coding gene Chr2:181595215-181599434 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027031
protein coding gene Chr2:188206733-188210727 (-)
A/J MGP_AJ_G0026997
protein coding gene Chr2:180447169-180451163 (-)
AKR/J MGP_AKRJ_G0026967
protein coding gene Chr2:185860947-185864941 (-)
BALB/cJ MGP_BALBcJ_G0027005
protein coding gene Chr2:180926966-180930960 (-)
C3H/HeJ MGP_C3HHeJ_G0026747
protein coding gene Chr2:186209500-186213494 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027451
protein coding gene Chr2:193652897-193656891 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024815
protein coding gene Chr2:171130470-171134700 (-)
CAST/EiJ MGP_CASTEiJ_G0026206
protein coding gene Chr2:184481179-184485173 (-)
CBA/J MGP_CBAJ_G0026724
protein coding gene Chr2:200650749-200654743 (-)
DBA/2J MGP_DBA2J_G0026861
protein coding gene Chr2:179549096-179553090 (-)
FVB/NJ MGP_FVBNJ_G0026827
protein coding gene Chr2:178168523-178172517 (-)
LP/J MGP_LPJ_G0026963
protein coding gene Chr2:188228299-188232293 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026847
protein coding gene Chr2:203215121-203219115 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027511
protein coding gene Chr2:185831655-185835649 (-)
PWK/PhJ MGP_PWKPhJ_G0025942
protein coding gene Chr2:177075117-177079120 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025742
protein coding gene Chr2:182332585-182336576 (-)
WSB/EiJ MGP_WSBEiJ_G0026278
protein coding gene Chr2:186815243-186819239 (-)



Homology
more
  • Human Ortholog
    SAMD10, sterile alpha motif domain containing 10
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SAMD10, sterile alpha motif domain containing 10
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf136, dJ591C20, dJ591C20.7
  • Links
    NCBI Gene ID: 140700
    neXtProt AC: NX_Q9BYL1
    UniProt: Q9BYL1

  • Chr Location
    20q13.33; chr20:63974113-63980788 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038605 Ensembl Gene Model | MGI Sequence Detail 3995 C57BL/6J ±  kb
transcript ENSMUST00000060173 Ensembl | MGI Sequence Detail 2164 Not Applicable  
polypeptide ENSMUSP00000060499 Ensembl | MGI Sequence Detail 202 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory