Arhgap29 MGI Mouse Gene Detail - MGI:2443818 - Rho GTPase activating protein 29

Arhgap29 Gene Detail

Symbol

Arhgap29
Name

Rho GTPase activating protein 29
Synonyms

6720461J18Rik, B130017I01Rik, C76601, Parg1

Feature Type

protein coding gene
IDs

MGI:2443818
NCBI Gene: 214137

Sequence Map

Chr3:121952541-122016753 bp, + strand
From VEGA annotation of GRCm38

Mouse Genome Browser
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Sequence

64213 bp ± kb flank
Genome Browsers

VEGA | Ensembl | UCSC | NCBI

Genetic Map

Chromosome 3, 52.94 cM
Mapping Data

2 experiments

Human Ortholog

ARHGAP29, Rho GTPase activating protein 29

Vertebrate Orthologs

7

Human Ortholog

ARHGAP29, Rho GTPase activating protein 29
Orthology source: HomoloGene, HGNC
Synonyms

PARG1
Links

HGNC:30207

NCBI Gene ID: 9411

neXtProt AC: NX_Q52LW3

UniProt: Q52LW3
Chr Location

1p22.1; chr1:94168907-94275068 (-) GRCh38.p7

HomoloGene

Vertebrate Homology Class 3539
1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 macaque, rhesus
HCOP

human homology predictions: ARHGAP29
Gene Tree

Arhgap29

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References

1 with disease annotations

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

3
Chemically induced (other)

1
Endonuclease-mediated

1
Radiation induced

1
Genomic Mutations

2 involving Arhgap29
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

23 strains or lines available

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All GO Annotations

7
GO References

5

External Resources

FuncBase

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	receptor	receptor binding	RNA binding	transcription	transferase	transporter

Biological Process

nucleic acid-templated transcription	carbohydrate derivative metabolism	cell death	cell differentiation	cell proliferation	cellular component organization	establishment of localization	homeostatic process	immune system process	lipid metabolic process	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

91
Tissues

14
cDNA Data

151
Literature Summary

2

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

GEISHA ARHGAP29

Xenbase arhgap29

ZFIN arhgap29a, arhgap29b

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Arhgap29 interacts with 423 markers (Mir7-1, Mir7-2, Mir7b, ...) View All

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All Sequences

60
RefSeq

8
UniProt

5
CCDS

CCDS17807.1
UniGene

229287

			Length	Strain/Species	Flank
genomic	OTTMUSG00000026603	VEGA Gene Model \| MGI Sequence Detail	64213	C57BL/6J	± kb
transcript	OTTMUST00000065825	VEGA \| MGI Sequence Detail	5787	Not Applicable
polypeptide	OTTMUSP00000032859	VEGA \| MGI Sequence Detail	1266	Not Applicable

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SNPs within 2kb

530 from dbSNP Build 142

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UniProt

5 Sequences
Protein Ontology

PR:000004235 rho GTPase-activating protein 29

(term hierarchy)
InterPro Domains

IPR027267 Arfaptin homology (AH) domain/BAR domain

IPR031160 F-BAR domain

IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

IPR000198 Rho GTPase-activating protein domain

IPR008936 Rho GTPase activation protein

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All nucleic 154

cDNA 152

Primer pair 1

Other 1

Microarray probesets 2

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MGI:1924435, MGI:2139903, MGI:2140040

Summaries

All 33

Developmental Gene Expression 2

Diseases 1

Gene Ontology 5

Phenotypes 4
Earliest

J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
Latest

J:239366 Chintala H, et al., The matricellular protein CCN1 controls retinal angiogenesis by targeting VEGF, Src homology 2 domain phosphatase-1 and Notch signaling. Development. 2015 Jul 01;142(13):2364-74

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support.	last database update 07/11/2017 MGI 6.10