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Fbxo40 Gene Detail
Summary
  • Symbol
    Fbxo40
  • Name
    F-box protein 40
  • Synonyms
    9830003A13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443753
    NCBI Gene: 207215
Location & Maps
more
  • Sequence Map
    Chr16:36963460-36990467 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      27008 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 26.32 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    FBXO40, F-box protein 40
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FBXO40, F-box protein 40
    Orthology source: HGNC, HomoloGene
  • Synonyms
    FBX40
  • Links
    NCBI Gene ID: 51725
    neXtProt AC: NX_Q9UH90

  • Chr Location
    3q13.33; chr3:121593323-121630292 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 9459
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: FBXO40
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024756 VEGA Gene Model | MGI Sequence Detail 27008 C57BL/6J ±  kb
transcript OTTMUST00000060962 VEGA | MGI Sequence Detail 5137 Not Applicable  
polypeptide OTTMUSP00000029808 VEGA | MGI Sequence Detail 710 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    155 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Gene Ontology 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory