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BC022687 Gene Detail
Summary
  • Symbol
    BC022687
  • Name
    cDNA sequence BC022687
  • Synonyms
    C130001I08Rik, Flj20080
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443738
    NCBI Gene: 217887
  • Gene Overview
    MyGene.info: C14orf79
Location & Maps
more
  • Sequence Map
    Chr12:112808975-112816245 bp, + strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7271 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 61.20 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    C14orf79, chromosome 14 open reading frame 79
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C14orf79, chromosome 14 open reading frame 79
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 122616
    neXtProt AC: NX_Q96F83

  • Chr Location
    14q32.33; chr14:104986279-105000307 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    6
  • Gene trapped
    3
  • Targeted
    3
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 217887 NCBI Gene Model | MGI Sequence Detail 7271 C57BL/6J ±  kb
transcript NM_145450 RefSeq | MGI Sequence Detail 1915 C57BL/6  
polypeptide Q8BHN9 UniProt | EBI | MGI Sequence Detail 321 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    135 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR029205 Aftiphilin, clathrin-binding box
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 5
Other
Accession IDs
less
MGI:2144997
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory