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BC022687
Gene Detail
Symbol

Name
ID
BC022687
cDNA sequence BC022687
MGI:2443738
Synonyms
C130001I08Rik, Flj20080
Feature Type
protein coding gene
Genetic Map
Chromosome 12
61.20 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:112808975-112816245 bp, + strand
From NCBI annotation of GRCm38

  7271 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17077  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 chicken

HCOP human homology predictions: C14orf79
Gene Tree: BC022687

Human
homologs
C14orf79, chromosome 14 open reading frame 79
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 122616
neXtProt AC: NX_Q96F83

Human Chr (Location): 14q32.33; chr14:104986279-105000307 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(3) Targeted(3)
Incidental mutations (data from APF )
Interactions
BC022687 interacts with 61 markers (Mir18, Mir22, Mir147, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(5)
Other database
links
Ensembl Gene Model ENSMUSG00000037594 (Evidence)
Entrez Gene 217887 (Evidence)
UniGene 186678
DFCI TC1581467
DoTS DT.110949894, DT.60103000
NIA Mouse Gene Index U014457
Consensus CDS Project CCDS49192.1
International Mouse Phenotyping Consortium Status BC022687
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 217887 NCBI Gene Model | MGI Sequence Detail 7271 C57BL/6J ±  kb
transcript NM_145450 RefSeq | MGI Sequence Detail 1915 C57BL/6 
polypeptide Q8BHN9 UniProt | EBI | MGI Sequence Detail 321 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(135 from dbSNP Build 137)
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:2144997

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/20/2015
MGI 5.22
The Jackson Laboratory