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Fubp3 Gene Detail
Summary
  • Symbol
    Fubp3
  • Name
    far upstream element (FUSE) binding protein 3
  • Synonyms
    A330051M14Rik, FBP3, Marta2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443699
    NCBI Gene: 320267
Location & Maps
more
  • Sequence Map
    Chr2:31572651-31617526 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      44876 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 21.84 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    FUBP3, far upstream element binding protein 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FUBP3, far upstream element binding protein 3
    Orthology source: HomoloGene
  • Synonyms
    FBP3
  • Links
    NCBI Gene ID: 8939
    neXtProt AC: NX_Q96I24

  • Chr Location
    9q34.11; chr9:130578857-130638352 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 45954
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: FUBP3
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000012074 VEGA Gene Model | MGI Sequence Detail 44876 C57BL/6J ±  kb
transcript OTTMUST00000028726 VEGA | MGI Sequence Detail 3648 Not Applicable  
polypeptide OTTMUSP00000012997 VEGA | MGI Sequence Detail 575 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    99 from dbSNP Build 142
Protein
Information
less
  • UniProt
    12 Sequences
  • InterPro Domains
    IPR015096 Domain of unknown function DUF1897
    IPR004087 K Homology domain
    IPR004088 K Homology domain, type 1
Molecular
Reagents
less
  • All nucleic 66
    cDNA 64
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:2139232
References
more
  • Summaries
    All 31
    Developmental Gene Expression 3
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:193925 Zivraj KH, et al., The RNA-binding protein MARTA2 regulates dendritic targeting of MAP2 mRNAs in rat neurons. J Neurochem. 2013 Mar;124(5):670-84

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory