Slc12a8
Gene Detail

Symbol Name ID

Slc12a8 solute carrier family 12 (potassium/chloride transporters), member 8 MGI:2443672

Synonyms

E330020C02Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 16

24.12 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr16:33517328-33664135 bp, + strand From VEGA annotation of GRCm38   146808 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Slc12a8 ± 2 cM)

Gene Tree: Slc12a8

Human ortholog

SLC12A8 solute carrier family 12 (potassium/chloride transporters), member 8 NCBI Gene ID 84561
Human Synonyms: CCC9
Human Chr3:124801480-124931609 bp, - strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(20) : Gene trapped(20)
 

Mice homozygous for disruptions in this gene display a normal phenotype.

 

Gene Ontology (GO) classifications

All GO classifications: (9 annotations)

Process	ion transport, potassium ion transport, ...
Component	integral to membrane, membrane
Function	symporter activity

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22

Assay Type	Results
RNA in situ	94

cDNA source data(26)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(27) cDNA(26) Primer pair(1)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000027311 (Evidence)
Ensembl Gene Model	ENSMUSG00000035506 (Evidence)
Entrez Gene	171286 (Evidence)
UniGene	35253
DFCI	TC1586516, TC1614226, TC1623986, TC1641162, TC1687809
DoTS	DT.101714955, DT.40141651, DT.91335057, DT.91576140
NIA Mouse Gene Index	U017040
Consensus CDS Project	CCDS37317.1, CCDS49834.1
International Mouse Knockout Project Status	Slc12a8

Sequences

Length	Strain/Species
genomic	OTTMUSG00000027311	VEGA Gene Model | MGI Sequence Detail	146808	C57BL/6J
transcript	OTTMUST00000067507	VEGA | MGI Sequence Detail	2656	Not Applicable
polypeptide	OTTMUSP00000033981	VEGA | MGI Sequence Detail	705	Not Applicable

All sequences(53) RefSeq(4) UniProt(4)

Polymorphisms

SNPs(654 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR004841	Amino acid permease domain
Protein Ontology	PR:000014931	solute carrier family 12 member 8

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)