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Slc12a8
Gene Detail
 Symbol
Name
ID
Slc12a8
solute carrier family 12 (potassium/chloride transporters), member 8
MGI:2443672
Synonyms E330020C02Rik
Feature Type protein coding gene
Genetic Map
Chromosome 16
24.12 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr16:33517328-33664135 bp, + strand
From VEGA annotation of GRCm38

  146808 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11628  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc12a8

Human
homologs
Human Homolog SLC12A8, solute carrier family 12, member 8
NCBI Gene ID 84561
neXtProt AC  NX_A0AV02
Human Synonyms  CCC9
Human Chr (Location)  3q21.2; chr3:125082636-125212765 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(20)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for disruptions in this gene display a normal phenotype.
 
Interactions
Slc12a8 interacts with 187 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process ion transport, potassium ion transport, ...
Component integral component of membrane, membrane
Function symporter activity
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (129)    Tissues (129)    Images (2)
Theiler Stages: 22, 26, 28
Assay TypeResults
RNA in situ 129
cDNA source data(26)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(26) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027311 (Evidence)
Ensembl Gene ModelENSMUSG00000035506 (Evidence)
Entrez Gene171286 (Evidence)
UniGene35253
DFCITC1586516, TC1614226, TC1623986, TC1641162, TC1687809
DoTSDT.101714955, DT.40141651, DT.91335057, DT.91576140
NIA Mouse Gene IndexU017040
Consensus CDS ProjectCCDS37317.1, CCDS49834.1
International Mouse Knockout Project StatusSlc12a8
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027311 VEGA Gene Model | MGI Sequence Detail 146808 C57BL/6J ±  kb
transcript OTTMUST00000067507 VEGA | MGI Sequence Detail 2656 Not Applicable 
polypeptide OTTMUSP00000033981 VEGA | MGI Sequence Detail 705 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(20) UniProt(4)
Polymorphisms SNPs within 2kb(882 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004841 Amino acid permease domain
Protein Ontology PR:000014931 solute carrier family 12 member 8
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory