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Dlec1
Gene Detail
Symbol

Name
ID
Dlec1
deleted in lung and esophageal cancer 1
MGI:2443671
Synonyms
D630005C06Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 9
71.32 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:119102478-119148246 bp, + strand
From VEGA annotation of GRCm38

  45769 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:84733  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Dlec1

Human
homologs
Human Homolog DLEC1, deleted in lung and esophageal cancer 1
NCBI Gene ID 9940
neXtProt AC  NX_Q9Y238
Human Synonyms  CFAP81, DLC1, F56
Human Chr (Location)  3p21.3; chr3:38039006-38122737 (+)  GRCh38
Disease Associations  (2) Diseases Associated with Human DLEC1
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(2) Spontaneous(1) Targeted(3)
Genomic Mutations involving Dlec1 (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Dlec1 interacts with 136 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cytoplasm
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000033511 (Evidence)
Ensembl Gene ModelENSMUSG00000038060 (Evidence)
Entrez Gene320256 (Evidence)
UniGene110648
DFCITC1587770, TC1605668, TC1683400
DoTSDT.91444120, DT.40140548, DT.101725671
NIA Mouse Gene IndexU011134
Consensus CDS ProjectCCDS52963.1
International Mouse Knockout Project StatusDlec1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033511 VEGA Gene Model | MGI Sequence Detail 45769 C57BL/6J ±  kb
transcript OTTMUST00000084304 VEGA | MGI Sequence Detail 5815 Not Applicable 
polypeptide OTTMUSP00000045413 VEGA | MGI Sequence Detail 1741 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(18) UniProt(7)
Polymorphisms
SNPs within 2kb(389 from dbSNP Build 137)    SNPs within 2kb including multiple locations(403)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000006507 deleted in lung and esophageal cancer protein 1
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory