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Rpp38 Gene Detail
Summary
  • Symbol
    Rpp38
  • Name
    ribonuclease P/MRP 38 subunit
  • Synonyms
    C330006A15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443607
    NCBI Gene: 227522
  • Gene Overview
    MyGene.info: RPP38
Location & Maps
more
  • Genetic Map
    Chromosome 2, 1.87 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RPP38, ribonuclease P/MRP subunit p38
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPP38, ribonuclease P/MRP subunit p38
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 10557
    neXtProt AC: NX_P78345

  • Chr Location
    10p13; chr10:15097180-15104257 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 4680
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RPP38
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    42
  • Gene trapped
    41
  • Targeted
    1
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010784 VEGA Gene Model | MGI Sequence Detail 3695 C57BL/6J ±  kb
transcript OTTMUST00000025222 VEGA | MGI Sequence Detail 1042 Not Applicable  
polypeptide OTTMUSP00000011571 VEGA | MGI Sequence Detail 280 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    8 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory