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Fndc7 Gene Detail
Summary
  • Symbol
    Fndc7
  • Name
    fibronectin type III domain containing 7
  • Synonyms
    E230011A21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443535
    NCBI Gene: 320181
Location & Maps
more
  • Sequence Map
    Chr3:108853683-108890008 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      36326 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 47.84 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    FNDC7, fibronectin type III domain containing 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    FNDC7, fibronectin type III domain containing 7
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 163479
    neXtProt AC: NX_Q5VTL7

  • Chr Location
    1p13.3; chr1:108712416-108743262 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Fndc7
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007285 VEGA Gene Model | MGI Sequence Detail 36326 C57BL/6J ±  kb
transcript OTTMUST00000016832 VEGA | MGI Sequence Detail 3477 Not Applicable  
polypeptide OTTMUSP00000007754 VEGA | MGI Sequence Detail 737 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    250 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 6
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory