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A530064D06Rik Gene Detail
Summary
  • Symbol
    A530064D06Rik
  • Name
    RIKEN cDNA A530064D06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443476
    NCBI Gene: 328830
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:48151896-48167257 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 23.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443476
protein coding gene Chr17:48149126-48167275 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023863
protein coding gene Chr17:49427237-49443313 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0023791
protein coding gene Chr17:48584819-48586113 (-)
BALB/cJ MGP_BALBcJ_G0023825
protein coding gene Chr17:48070771-48086685 (-)
C3H/HeJ MGP_C3HHeJ_G0023587
protein coding gene Chr17:49292246-49308880 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021717
protein coding gene Chr17:44832951-44904831 (-)
CAST/EiJ MGP_CASTEiJ_G0023069
protein coding gene Chr17:49427566-49489979 (-)
CBA/J MGP_CBAJ_G0023564
protein coding gene Chr17:53342968-53357821 (-)
DBA/2J MGP_DBA2J_G0023693
protein coding gene Chr17:46885543-46900738 (-)
FVB/NJ MGP_FVBNJ_G0023659
protein coding gene Chr17:46502141-46520729 (-)
LP/J MGP_LPJ_G0023773
protein coding gene Chr17:50068763-50085757 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023687
protein coding gene Chr17:52835620-52858953 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024314
protein coding gene Chr17:48930108-48954545 (-)
PWK/PhJ MGP_PWKPhJ_G0022815
protein coding gene Chr17:46240600-46494377 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022629
protein coding gene Chr17:45799271-45805535 (-)
WSB/EiJ MGP_WSBEiJ_G0023134
protein coding gene Chr17:49474271-49531085 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 328830 NCBI Gene Model | MGI Sequence Detail 15362 C57BL/6J ±  kb
transcript NM_178796 RefSeq | MGI Sequence Detail 1900 C57BL/6  
polypeptide NP_848911 RefSeq | MGI Sequence Detail 229 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory