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A530064D06Rik Gene Detail
Summary
  • Symbol
    A530064D06Rik
  • Name
    RIKEN cDNA A530064D06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443476
    NCBI Gene: 328830
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:48151896-48167257 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 23.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443476
protein coding gene Chr17:48149126-48167275 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023863
protein coding gene Chr17:49427237-49443313 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0023791
protein coding gene Chr17:48584819-48586113 (-)
BALB/cJ MGP_BALBcJ_G0023825
protein coding gene Chr17:48070771-48086685 (-)
C3H/HeJ MGP_C3HHeJ_G0023587
protein coding gene Chr17:49292246-49308880 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0021717
protein coding gene Chr17:44832951-44904831 (-)
CAST/EiJ MGP_CASTEiJ_G0023069
protein coding gene Chr17:49427566-49489979 (-)
CBA/J MGP_CBAJ_G0023564
protein coding gene Chr17:53342968-53357821 (-)
DBA/2J MGP_DBA2J_G0023693
protein coding gene Chr17:46885543-46900738 (-)
FVB/NJ MGP_FVBNJ_G0023659
protein coding gene Chr17:46502141-46520729 (-)
LP/J MGP_LPJ_G0023773
protein coding gene Chr17:50068763-50085757 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023687
protein coding gene Chr17:52835620-52858953 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024314
protein coding gene Chr17:48930108-48954545 (-)
PWK/PhJ MGP_PWKPhJ_G0022815
protein coding gene Chr17:46240600-46494377 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022629
protein coding gene Chr17:45799271-45805535 (-)
WSB/EiJ MGP_WSBEiJ_G0023134
protein coding gene Chr17:49474271-49531085 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 328830 NCBI Gene Model | MGI Sequence Detail 15362 C57BL/6J ±  kb
transcript NM_178796 RefSeq | MGI Sequence Detail 1900 C57BL/6  
polypeptide NP_848911 RefSeq | MGI Sequence Detail 229 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory