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Atf7
Gene Detail
 Symbol
Name
ID
Atf7
activating transcription factor 7
MGI:2443472
Synonyms 1110012F10Rik, 9430065F09Rik, C130020M04Rik
Feature Type protein coding gene
Genetic Map
Chromosome 15
57.66 cM, cytoband F3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr15:102525946-102625464 bp, - strand
From VEGA annotation of GRCm38

  99519 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4994  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: cyclic AMP-dependent transcription factor, CRE-BP1 type

Human
homologs
Human Homolog ATF7, activating transcription factor 7
NCBI Gene ID 11016
neXtProt AC  NX_P17544
Human Synonyms  ATFA
Human Chr (Location)  12q13; chr12:53507856-53626415 (-)  GRCh38
Alleles
and
phenotypes
All alleles(4) : Targeted(4)
 
Mice homozygous for one knock-out allele exhibit increased marble burying, increased startle response, and decreased prepulse inhibition.
 
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process regulation of transcription, DNA-templated
Component nuclear periphery
Function enzyme binding, mitogen-activated protein kinase binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (68)    Tissues (57)    Images (10)
Theiler Stages: 2, 3, 4, 5, 19, 23, 28
Assay TypeResults
RNA in situ 53
RT-PCR 15
cDNA source data(20)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(22) cDNA(21) Primer pair(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000044910 (Evidence)
Ensembl Gene ModelENSMUSG00000071584 (Evidence), ENSMUSG00000099083 (Evidence)
Entrez Gene223922 (Evidence)
DFCITC1585914, TC1603412, TC1633747, TC1640583, TC1660527
DoTSDT.101256796, DT.101266527, DT.101711111, DT.110813402, DT.110813419, DT.40150333, DT.40151483, DT.91317565, DT.91363549, DT.91426892
NIA Mouse Gene IndexU036699
Consensus CDS ProjectCCDS37230.1
International Mouse Knockout Project StatusAtf7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044910 VEGA Gene Model | MGI Sequence Detail 99519 C57BL/6J ±  kb
transcript OTTMUST00000118034 VEGA | MGI Sequence Detail 7147 Not Applicable 
polypeptide OTTMUSP00000065924 VEGA | MGI Sequence Detail 483 Not Applicable 

For the selected sequences
All sequences(84) RefSeq(2)
Polymorphisms SNPs within 2kb(115 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000004404 cyclic AMP-dependent transcription factor ATF-7
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:1915865, MGI:1924604, MGI:2146037

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory