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A130050O07Rik Gene Detail
Summary
  • Symbol
    A130050O07Rik
  • Name
    RIKEN cDNA A130050O07 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443458
    NCBI Gene: 320138
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:137927251-137930273 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 60.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    69 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443458
lncRNA gene Chr1:137927251-137930273 (+)
129S1/SvImJ MGP_129S1SvImJ_G0000613
unclassified gene Chr1:141925290-141928309 (+)
A/J MGP_AJ_G0000587
unclassified gene Chr1:136440824-136443844 (+)
AKR/J MGP_AKRJ_G0000576
unclassified gene Chr1:140532324-140535346 (+)
BALB/cJ MGP_BALBcJ_G0000579
unclassified gene Chr1:136772851-136775873 (+)
C3H/HeJ MGP_C3HHeJ_G0000566
unclassified gene Chr1:140634731-140637751 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000696
unclassified gene Chr1:146918419-146921441 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0000441
unclassified gene Chr1:129494836-129497883 (+)
CAST/EiJ MGP_CASTEiJ_G0000560
unclassified gene Chr1:139787376-139790408 (+)
CBA/J MGP_CBAJ_G0000557
unclassified gene Chr1:151980733-151983753 (+)
DBA/2J MGP_DBA2J_G0000561
unclassified gene Chr1:135423893-135426916 (+)
FVB/NJ MGP_FVBNJ_G0000575
unclassified gene Chr1:134078945-134081964 (+)
LP/J MGP_LPJ_G0000619
unclassified gene Chr1:143037075-143040097 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0000570
unclassified gene Chr1:157630428-157633447 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0000688
unclassified gene Chr1:140305574-140308596 (+)
PWK/PhJ MGP_PWKPhJ_G0000512
unclassified gene Chr1:134510379-134513545 (+)
SPRET/EiJ MGP_SPRETEiJ_G0000488
unclassified gene Chr1:139293099-139296115 (+)
WSB/EiJ MGP_WSBEiJ_G0000563
unclassified gene Chr1:140335428-140338450 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102277 Ensembl Gene Model | MGI Sequence Detail 3023 C57BL/6J ±  kb
transcript AK037803 GenBank | EMBL | DDBJ | MGI Sequence Detail 2970 C57BL/6J  
polypeptide Q8CAR5 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory