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Zc3hav1l Gene Detail
Summary
  • Symbol
    Zc3hav1l
  • Name
    zinc finger CCCH-type, antiviral 1-like
  • Synonyms
    B130055L09Rik, E430016P22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443387
    NCBI Gene: 209032
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:38287396-38299259 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 17.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443387
protein coding gene Chr6:38287394-38299259 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030583
protein coding gene Chr6:36579569-36591996 (-)
A/J MGP_AJ_G0030556
protein coding gene Chr6:34991858-35003654 (-)
AKR/J MGP_AKRJ_G0030483
protein coding gene Chr6:36103950-36116188 (-)
BALB/cJ MGP_BALBcJ_G0030566
protein coding gene Chr6:35183334-35195111 (-)
C3H/HeJ MGP_C3HHeJ_G0030279
protein coding gene Chr6:36106574-36122995 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031020
protein coding gene Chr6:37495493-37507302 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028232
protein coding gene Chr6:32899316-32913405 (-)
CAST/EiJ MGP_CASTEiJ_G0029681
protein coding gene Chr6:36003276-36014896 (-)
CBA/J MGP_CBAJ_G0030257
protein coding gene Chr6:38935760-38947821 (-)
DBA/2J MGP_DBA2J_G0030401
protein coding gene Chr6:34812637-34824396 (-)
FVB/NJ MGP_FVBNJ_G0030355
protein coding gene Chr6:34598605-34610339 (-)
LP/J MGP_LPJ_G0030488
protein coding gene Chr6:36627823-36639886 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030391
protein coding gene Chr6:41298382-41313567 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031050
protein coding gene Chr6:36036885-36048679 (-)
PWK/PhJ MGP_PWKPhJ_G0029395
protein coding gene Chr6:34459433-34471436 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029231
protein coding gene Chr6:35757521-35769394 (-)
WSB/EiJ MGP_WSBEiJ_G0029757
protein coding gene Chr6:35971863-35984567 (-)



Homology
more
  • Human Ortholog
    ZC3HAV1L, zinc finger CCCH-type containing, antiviral 1 like
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZC3HAV1L, zinc finger CCCH-type containing, antiviral 1 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf39
  • Links
    NCBI Gene ID: 92092
    neXtProt AC: NX_Q96H79
    UniProt: Q96H79

  • Chr Location
    7q34; chr7:139021498-139036472 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047749 Ensembl Gene Model | MGI Sequence Detail 11864 C57BL/6J ±  kb
    transcript ENSMUST00000058524 Ensembl | MGI Sequence Detail 6536 Not Applicable  
    polypeptide ENSMUSP00000062475 Ensembl | MGI Sequence Detail 296 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000017602 zinc finger CCCH-type antiviral protein 1-like
    • InterPro Domains
      IPR036388 Winged helix-like DNA-binding domain superfamily
      IPR041360 ZAP, helix turn helix N-terminal domain
      IPR000571 Zinc finger, CCCH-type
      IPR026693 Zinc finger CCCH-type antiviral protein 1-like
    Molecular
    Reagents
    less
    • All nucleic 36
      cDNA 36

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2444309
    References
    more
    • Summaries
      All 26
      Gene Ontology 3
      Phenotypes 6
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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    Funding Information
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    last database update
    07/29/2020
    MGI 6.15
    The Jackson Laboratory