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Chtf8
Gene Detail
 Symbol
Name
ID
Chtf8
CTF8, chromosome transmission fidelity factor 8
MGI:2443370
Synonyms 5830457O10Rik
Feature Type protein coding gene
Genetic Map
Chromosome 8
53.30 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:106883863-106893601 bp, - strand
From VEGA annotation of GRCm38

  9739 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:84588  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Chtf8

Human
homologs
Human Homolog CHTF8, CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
NCBI Gene ID 54921
neXtProt AC  NX_P0CG12, NX_P0CG13
Human Synonyms  CTF8, DERPC
Human Chr (Location)  16q22.1; chr16:69118009-69132590 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(151) : Gene trapped(150) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Chtf8 interacts with 318 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process cell cycle, DNA replication
Component extracellular vesicular exosome, nucleus
Function DNA binding
External Resources: FuncBase
Expression
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000042130 (Evidence)
Ensembl Gene ModelENSMUSG00000046691 (Evidence)
Entrez Gene214987 (Evidence)
DFCITC1574406
DoTSDT.534331, DT.97412604
NIA Mouse Gene IndexU030204
Consensus CDS ProjectCCDS57643.1
International Mouse Knockout Project StatusChtf8
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042130 VEGA Gene Model | MGI Sequence Detail 9739 C57BL/6J ±  kb
transcript OTTMUST00000110543 VEGA | MGI Sequence Detail 2730 Not Applicable 
polypeptide OTTMUSP00000061685 VEGA | MGI Sequence Detail 533 Not Applicable 

For the selected sequences
All sequences(54) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(18 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018607 Chromosome transmission fidelity protein 8
Protein Ontology PR:000030060 chromosome transmission fidelity protein 8 homolog
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory