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Olfm5 Gene Detail
Summary
  • Symbol
    Olfm5
  • Name
    olfactomedin 5
  • Synonyms
    E030002O03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443346
    NCBI Gene: 244180
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:104153013-104164816 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 54.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    233 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443346
protein coding gene Chr7:104153013-104164831 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032705
protein coding gene Chr7:107376544-107386961 (-)
A/J MGP_AJ_G0032680
protein coding gene Chr7:104570647-104579946 (-)
AKR/J MGP_AKRJ_G0032613
protein coding gene Chr7:107093361-107102100 (-)
BALB/cJ MGP_BALBcJ_G0032690
protein coding gene Chr7:104298865-104307584 (-)
C3H/HeJ MGP_C3HHeJ_G0032401
protein coding gene Chr7:107445283-107455892 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033186
protein coding gene Chr7:111408171-111417712 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030181
protein coding gene Chr7:106651746-106658292 (-)
CAST/EiJ MGP_CASTEiJ_G0031730
protein coding gene Chr7:99087737-99095842 (-)
CBA/J MGP_CBAJ_G0032369
protein coding gene Chr7:115339776-115355034 (-)
DBA/2J MGP_DBA2J_G0032523
protein coding gene Chr7:102901004-102909953 (-)
FVB/NJ MGP_FVBNJ_G0032476
protein coding gene Chr7:102611784-102620734 (-)
LP/J MGP_LPJ_G0032616
protein coding gene Chr7:108704873-108713524 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032510
protein coding gene Chr7:116734243-116743600 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033213
protein coding gene Chr7:106289818-106299810 (-)
PWK/PhJ MGP_PWKPhJ_G0031444
protein coding gene Chr7:95896355-95905072 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031289
protein coding gene Chr7:93506332-93515272 (-)
WSB/EiJ MGP_WSBEiJ_G0031845
protein coding gene Chr7:107024851-107034018 (-)



Homology
more
  • Human Ortholog
    OLFM5P, olfactomedin family member 5, pseudogene
  • Vertebrate Orthologs
    3
  • Human Ortholog
    OLFM5P, olfactomedin family member 5, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 101927763

  • Chr Location
    chr11:5518310-5521785 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 244180 NCBI Gene Model | MGI Sequence Detail 11804 C57BL/6J ±  kb
transcript NM_172905 RefSeq | MGI Sequence Detail 2350 Not Specified  
polypeptide NP_766493 RefSeq | MGI Sequence Detail 496 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR003112 Olfactomedin-like domain
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory