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Lancl3 Gene Detail
Summary
  • Symbol
    Lancl3
  • Name
    LanC lantibiotic synthetase component C-like 3 (bacterial)
  • Synonyms
    6030463G20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443335
    NCBI Gene: 236285
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:9199973-9268085 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 4.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    364 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443335
protein coding gene ChrX:9199902-9268085 (.)
129S1/SvImJ MGP_129S1SvImJ_G0035553
protein coding gene ChrX:3869135-3986210 (+)
A/J MGP_AJ_G0035530
protein coding gene ChrX:3980236-4049444 (+)
AKR/J MGP_AKRJ_G0035463
protein coding gene ChrX:4009787-4084187 (+)
BALB/cJ MGP_BALBcJ_G0035523
protein coding gene ChrX:3935797-4004901 (+)
C3H/HeJ MGP_C3HHeJ_G0035240
protein coding gene ChrX:4064743-4132243 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036053
protein coding gene ChrX:3957579-4034003 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032922
protein coding gene ChrX:3337647-3423148 (+)
CAST/EiJ MGP_CASTEiJ_G0034532
protein coding gene ChrX:3761605-3873199 (+)
CBA/J MGP_CBAJ_G0035209
protein coding gene ChrX:4328252-4397522 (+)
DBA/2J MGP_DBA2J_G0035363
protein coding gene ChrX:3949022-4017424 (+)
FVB/NJ MGP_FVBNJ_G0035310
protein coding gene ChrX:3754144-3826359 (+)
LP/J MGP_LPJ_G0035445
protein coding gene ChrX:4068387-4188070 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035352
protein coding gene ChrX:4206151-4271669 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036065
protein coding gene ChrX:3863658-3932624 (+)
PWK/PhJ MGP_PWKPhJ_G0034233
protein coding gene ChrX:3434174-3547128 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034073
protein coding gene ChrX:3905534-4034147 (+)
WSB/EiJ MGP_WSBEiJ_G0034669
protein coding gene ChrX:3912945-4024168 (+)



Homology
more
  • Human Ortholog
    LANCL3, LanC like 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LANCL3, LanC like 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 347404
    neXtProt AC: NX_Q6ZV70
    UniProt: Q6ZV70

  • Chr Location
    Xp21.1; chrX:37571569-37684463 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 236285 NCBI Gene Model | MGI Sequence Detail 68113 C57BL/6J ±  kb
transcript NM_173414 RefSeq | MGI Sequence Detail 3920 C57BL/6  
polypeptide Q8CD19 UniProt | EBI | MGI Sequence Detail 420 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:249809 He C, et al., LanCL proteins are not Involved in Lanthionine Synthesis in Mammals. Sci Rep. 2017 Jan 20;7:40980

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory