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Zscan22 Gene Detail
Summary
  • Symbol
    Zscan22
  • Name
    zinc finger and SCAN domain containing 22
  • Synonyms
    D530006B18Rik, Hkr2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443312
    NCBI Gene: 232878
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:12897815-12909083 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 7.68 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    123 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443312
protein coding gene Chr7:12897809-12909083 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031655
protein coding gene Chr7:10294732-10306968 (+)
A/J MGP_AJ_G0031628
protein coding gene Chr7:10142194-10153525 (+)
AKR/J MGP_AKRJ_G0031551
protein coding gene Chr7:10368184-10382864 (+)
BALB/cJ MGP_BALBcJ_G0031633
protein coding gene Chr7:10247215-10258483 (+)
C3H/HeJ MGP_C3HHeJ_G0031355
protein coding gene Chr7:10465180-10477412 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032097
protein coding gene Chr7:10816760-10828028 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029191
protein coding gene Chr7:11740886-11752101 (+)
CAST/EiJ MGP_CASTEiJ_G0030713
protein coding gene Chr7:8023319-8034480 (+)
CBA/J MGP_CBAJ_G0031312
protein coding gene Chr7:11033131-11046771 (+)
DBA/2J MGP_DBA2J_G0031470
protein coding gene Chr7:10022623-10034068 (+)
FVB/NJ MGP_FVBNJ_G0031426
protein coding gene Chr7:10019453-10030927 (+)
LP/J MGP_LPJ_G0031557
protein coding gene Chr7:10382744-10399359 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031461
protein coding gene Chr7:11120966-11132369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032127
protein coding gene Chr7:10147966-10162920 (+)
PWK/PhJ MGP_PWKPhJ_G0030441
protein coding gene Chr7:8508735-8520886 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030267
protein coding gene Chr7:6252812-6265121 (+)
WSB/EiJ MGP_WSBEiJ_G0030808
protein coding gene Chr7:10172279-10183550 (+)



Homology
more
  • Human Ortholog
    ZSCAN22, zinc finger and SCAN domain containing 22
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ZSCAN22, zinc finger and SCAN domain containing 22
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HKR2, ZNF50
  • Links
    NCBI Gene ID: 342945
    neXtProt AC: NX_P10073
    UniProt: P10073

  • Chr Location
    19q13.43; chr19:58327000-58342346 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054715 Ensembl Gene Model | MGI Sequence Detail 11269 C57BL/6J ±  kb
transcript ENSMUST00000055528 Ensembl | MGI Sequence Detail 2620 Not Applicable  
polypeptide ENSMUSP00000057651 Ensembl | MGI Sequence Detail 496 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142223
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Phenotypes 6
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory