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Olfml2b Gene Detail
Summary
  • Symbol
    Olfml2b
  • Name
    olfactomedin-like 2B
  • Synonyms
    1110018N05Rik, 4832415H08Rik, photomedin-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443310
    NCBI Gene: 320078
  • Gene Overview
    MyGene.info: OLFML2B
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:170644532-170682789 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 76.95 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    752 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443310
protein coding gene Chr1:170644423-170682789 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016732
protein coding gene Chr1:176371106-176410517 (+)
A/J MGP_AJ_G0016712
protein coding gene Chr1:169183945-169222121 (+)
AKR/J MGP_AKRJ_G0016678
protein coding gene Chr1:174244235-174282487 (+)
BALB/cJ MGP_BALBcJ_G0016673
protein coding gene Chr1:169651691-169690728 (+)
C3H/HeJ MGP_C3HHeJ_G0016496
protein coding gene Chr1:174500817-174540412 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017134
protein coding gene Chr1:182201516-182239757 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014843
protein coding gene Chr1:160896094-160935251 (+)
CAST/EiJ MGP_CASTEiJ_G0016077
protein coding gene Chr1:174136060-174174150 (+)
CBA/J MGP_CBAJ_G0016471
protein coding gene Chr1:188697562-188736018 (+)
DBA/2J MGP_DBA2J_G0016578
protein coding gene Chr1:168033163-168071413 (+)
FVB/NJ MGP_FVBNJ_G0016575
protein coding gene Chr1:166393973-166432503 (+)
LP/J MGP_LPJ_G0016649
protein coding gene Chr1:177491054-177530101 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016601
protein coding gene Chr1:196021164-196059392 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017171
protein coding gene Chr1:174154674-174192837 (+)
PWK/PhJ MGP_PWKPhJ_G0015863
protein coding gene Chr1:167272623-167311116 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015647
protein coding gene Chr1:172901101-172938004 (+)
WSB/EiJ MGP_WSBEiJ_G0016139
protein coding gene Chr1:174269396-174307586 (+)



Homology
more
  • Human Ortholog
    OLFML2B, olfactomedin like 2B
  • Vertebrate Orthologs
    11
  • Human Ortholog
    OLFML2B, olfactomedin like 2B
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 25903
    neXtProt AC: NX_Q68BL8
    UniProt: Q68BL8

  • Chr Location
    1q23.3; chr1:161983192-162024465 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038463 Ensembl Gene Model | MGI Sequence Detail 38258 C57BL/6J ±  kb
transcript ENSMUST00000046792 Ensembl | MGI Sequence Detail 3095 Not Applicable  
polypeptide ENSMUSP00000047291 Ensembl | MGI Sequence Detail 746 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR003112 Olfactomedin-like domain
    IPR031233 Olfactomedin-like protein 2B
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 5
Other
Accession IDs
less
MGI:1915832, MGI:2138272
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:221550 Abonnenc M, et al., Extracellular matrix secretion by cardiac fibroblasts: role of microRNA-29b and microRNA-30c. Circ Res. 2013 Oct 25;113(10):1138-47

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory