About   Help   FAQ
Clvs2 Gene Detail
Summary
  • Symbol
    Clvs2
  • Name
    clavesin 2
  • Synonyms
    A330019N05Rik, Rlbp1l2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443223
    NCBI Gene: 215890
Location & Maps
more
  • Sequence Map
    Chr10:33512286-33624769 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      112484 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 18.62 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CLVS2, clavesin 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CLVS2, clavesin 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    bA160A10.4, C6orf212, C6orf213, RLBP1L2
  • Links
    NCBI Gene ID: 134829
    neXtProt AC: NX_Q5SYC1

  • Chr Location
    6q22.31; chr6:122995971-123072920 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 27894
    1 human;1 mouse;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CLVS2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Clvs2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028009 VEGA Gene Model | MGI Sequence Detail 112484 C57BL/6J ±  kb
transcript OTTMUST00000069365 VEGA | MGI Sequence Detail 2717 Not Applicable  
polypeptide OTTMUSP00000035215 VEGA | MGI Sequence Detail 327 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    282 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000014032 clavesin-2
  • InterPro Domains
    IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport
    IPR028636 Clavesin-2
    IPR001251 CRAL-TRIO lipid binding domain
    IPR011074 CRAL/TRIO, N-terminal domain
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/12/2016
MGI 6.04
The Jackson Laboratory