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Zfp384
Gene Detail
Symbol

Name
ID
Zfp384
zinc finger protein 384
MGI:2443203
Synonyms
C130073D16Rik, Ciz, Nmp4
Feature Type
protein coding gene
Genetic Map
Chromosome 6
59.17 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr6:125009145-125037865 bp, + strand
From VEGA annotation of GRCm38

  28721 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:15849  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 3 zebrafish

HCOP human homology predictions: ZNF384
Gene Tree: Zfp384

Human
homologs
ZNF384, zinc finger protein 384
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 171017
neXtProt AC: NX_Q8TF68

Human Synonyms: CAGH1, CAGH1A, CIZ, ERDA2, NMP4, NP, TNRC1

Human Chr (Location): chr12:6666477-6689572 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(13) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mice are small and males have a small testis. Some males develop infertility and exhibit variable degrees of spermatogenic cell degeneration within the seminiferous tubules and increased apoptosis of spermatogenic cells.
 
Interactions
Zfp384 interacts with 244 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process nucleocytoplasmic transport, positive regulation of protein secretion, ...
Component focal adhesion, nucleus
Function sequence-specific DNA binding, SH3 domain binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (24)    Tissues (15)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 24
cDNA source data(37)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase znf384    NEW 
Molecular
reagents
All nucleic(40) Genomic(1) cDNA(37) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000022893 (Evidence)
Ensembl Gene Model ENSMUSG00000038346 (Evidence)
Entrez Gene 269800 (Evidence)
UniGene 108677
DFCI TC1665198, TC1589161, TC1583556, TC1611915
DoTS DT.101229853, DT.101717915, DT.97404451, DT.91572110, DT.529927, DT.40151062, DT.91570807
NIA Mouse Gene Index U007405
Consensus CDS Project CCDS39631.1, CCDS57448.1
International Mouse Phenotyping Consortium Status Zfp384
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022893 VEGA Gene Model | MGI Sequence Detail 28721 C57BL/6J ±  kb
transcript OTTMUST00000055064 VEGA | MGI Sequence Detail 3072 Not Applicable 
polypeptide OTTMUSP00000026315 VEGA | MGI Sequence Detail 584 Not Applicable 

For the selected sequences
All sequences(114) RefSeq(22) UniProt(12)
Polymorphisms
SNPs within 2kb(120 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017858 zinc finger protein 384
References
(Earliest) J:75532 Alvarez MB, et al., Assignment of Nmp4 to mouse chromosome 6 band F1 flanked by D6Mit134 and D6Mit255 using radiation hybrid mapping and fluorescence in situ hybridization. Cytogenet Cell Genet. 2001;94(3-4):244-5
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(34)
Other
accession IDs
MGI:1927291, MGI:2141735

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory