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Harbi1 Gene Detail
Summary
  • Symbol
    Harbi1
  • Name
    harbinger transposase derived 1
  • Synonyms
    D230010M03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443194
    NCBI Gene: 241547
Location & Maps
more
  • Sequence Map
    Chr2:91710852-91721545 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10694 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.63 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    HARBI1, harbinger transposase derived 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    HARBI1, harbinger transposase derived 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C11orf77
  • Links
    NCBI Gene ID: 283254
    neXtProt AC: NX_Q96MB7

  • Chr Location
    11p11.2; chr11:46603306-46617894 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    45
  • Chemically induced (other)
    1
  • Gene trapped
    37
  • Radiation induced
    1
  • Targeted
    6
  • Genomic Mutations
    4 involving Harbi1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014309 VEGA Gene Model | MGI Sequence Detail 10694 C57BL/6J ±  kb
transcript OTTMUST00000033757 VEGA | MGI Sequence Detail 2308 Not Applicable  
polypeptide OTTMUSP00000015124 VEGA | MGI Sequence Detail 349 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    40 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000032419 nuclease HARBI1
  • EC
  • InterPro Domains
    IPR026103 Harbinger transposase-derived nuclease, animal
    IPR027806 Harbinger transposase-derived nuclease domain
Molecular
Reagents
less
  • All nucleic 25
    cDNA 25

    Microarray probesets 2
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory