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5930430L01Rik Gene Detail
Summary
  • Symbol
    5930430L01Rik
  • Name
    RIKEN cDNA 5930430L01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2443110
    NCBI Gene: 319982
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:148990056-148995215 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 89.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443110
lncRNA gene Chr5:148990056-148995223 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006869
lincRNA gene Chr5:154781167-154786334 (-)
A/J MGP_AJ_G0006863
lincRNA gene Chr5:148187187-148192367 (-)
AKR/J MGP_AKRJ_G0006833
lincRNA gene Chr5:152748194-152753366 (-)
BALB/cJ MGP_BALBcJ_G0006839
lincRNA gene Chr5:149433528-149438708 (-)
C3H/HeJ MGP_C3HHeJ_G0006784
lincRNA gene Chr5:153739386-153744566 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007004
lincRNA gene Chr5:160477923-160483090 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006255
lincRNA gene Chr5:142554975-142560267 (-)
CAST/EiJ MGP_CASTEiJ_G0006703
lincRNA gene Chr5:153337802-153343014 (-)
CBA/J MGP_CBAJ_G0006766
lincRNA gene Chr5:167170952-167176119 (-)
DBA/2J MGP_DBA2J_G0006786
lincRNA gene Chr5:147844625-147849792 (-)
FVB/NJ MGP_FVBNJ_G0006809
lincRNA gene Chr5:147083208-147088433 (-)
LP/J MGP_LPJ_G0006869
lincRNA gene Chr5:155461846-155467013 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006791
lincRNA gene Chr5:169348136-169353308 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007006
lincRNA gene Chr5:152687028-152692195 (-)
PWK/PhJ MGP_PWKPhJ_G0006644
lincRNA gene Chr5:146996225-147001562 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006552
lincRNA gene Chr5:149979883-149985073 (-)
WSB/EiJ MGP_WSBEiJ_G0006757
lincRNA gene Chr5:153499916-153505090 (-)



Homology
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Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 319982 NCBI Gene Model | MGI Sequence Detail 5160 C57BL/6J ±  kb
transcript NR_102383 RefSeq | MGI Sequence Detail 3985 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 1
References
more
  • Summaries
    All 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory