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Cntln Gene Detail
Summary
  • Symbol
    Cntln
  • Name
    centlein, centrosomal protein
  • Synonyms
    B430108F07Rik, D530005L17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443104
    NCBI Gene: 338349
  • Gene Overview
    MyGene.info: CNTLN
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:84884309-85131921 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 40.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1399 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443104
protein coding gene Chr4:84883510-85131923 (.)
129S1/SvImJ MGP_129S1SvImJ_G0028407
protein coding gene Chr4:84529537-84811064 (+)
A/J MGP_AJ_G0028368
protein coding gene Chr4:81610015-81857252 (+)
AKR/J MGP_AKRJ_G0028317
protein coding gene Chr4:83707973-83958091 (+)
BALB/cJ MGP_BALBcJ_G0028388
protein coding gene Chr4:81829858-82073172 (+)
C3H/HeJ MGP_C3HHeJ_G0028103
protein coding gene Chr4:84335132-84590486 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028827
protein coding gene Chr4:87834167-88109719 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026127
protein coding gene Chr4:77542277-77778518 (+)
CAST/EiJ MGP_CASTEiJ_G0027544
protein coding gene Chr4:82238680-82502320 (+)
CBA/J MGP_CBAJ_G0028072
protein coding gene Chr4:90522436-90795628 (+)
DBA/2J MGP_DBA2J_G0028221
protein coding gene Chr4:81386256-81648788 (+)
FVB/NJ MGP_FVBNJ_G0028187
protein coding gene Chr4:80381375-80629962 (+)
LP/J MGP_LPJ_G0028321
protein coding gene Chr4:84890494-85156209 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028216
protein coding gene Chr4:95628061-95906486 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028864
protein coding gene Chr4:83771435-84030588 (+)
PWK/PhJ MGP_PWKPhJ_G0027267
protein coding gene Chr4:79736403-79989154 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027092
protein coding gene Chr4:81336539-81606556 (+)
WSB/EiJ MGP_WSBEiJ_G0027620
protein coding gene Chr4:83941717-84204592 (+)



Homology
more
  • Human Ortholog
    CNTLN, centlein
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CNTLN, centlein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA340N12.1, C9orf101, C9orf39
  • Links
    NCBI Gene ID: 54875
    neXtProt AC: NX_Q9NXG0
    UniProt: Q9NXG0

  • Chr Location
    9p22.2; chr9:17134991-17510019 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9805
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CNTLN
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038070 Ensembl Gene Model | MGI Sequence Detail 247613 C57BL/6J ±  kb
transcript ENSMUST00000047023 Ensembl | MGI Sequence Detail 5528 Not Applicable  
polypeptide ENSMUSP00000044138 Ensembl | MGI Sequence Detail 1397 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 22

    Microarray probesets 3
Other
Accession IDs
less
MGI:1925769, MGI:2140280
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory