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Fam78b Gene Detail
Summary
  • Symbol
    Fam78b
  • Name
    family with sequence similarity 78, member B
  • Synonyms
    C030014K22Rik, C030020L09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443050
    NCBI Gene: 226610
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:167001417-167091302 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 74.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    868 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443050
protein coding gene Chr1:167001417-167091302 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016709
protein coding gene Chr1:172540208-172634375 (+)
A/J MGP_AJ_G0016690
protein coding gene Chr1:165503125-165599781 (+)
AKR/J MGP_AKRJ_G0016656
protein coding gene Chr1:170517015-170608020 (+)
BALB/cJ MGP_BALBcJ_G0016651
protein coding gene Chr1:165987196-166077577 (+)
C3H/HeJ MGP_C3HHeJ_G0016475
protein coding gene Chr1:170736223-170831368 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017112
protein coding gene Chr1:178317600-178416481 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014821
protein coding gene Chr1:157360827-157450186 (+)
CAST/EiJ MGP_CASTEiJ_G0016055
protein coding gene Chr1:170327536-170428597 (+)
CBA/J MGP_CBAJ_G0016450
protein coding gene Chr1:184648127-184748985 (+)
DBA/2J MGP_DBA2J_G0016556
protein coding gene Chr1:164359220-164449826 (+)
FVB/NJ MGP_FVBNJ_G0016554
protein coding gene Chr1:162800656-162891096 (+)
LP/J MGP_LPJ_G0016627
protein coding gene Chr1:173609280-173707493 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016579
protein coding gene Chr1:192051686-192149262 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017148
protein coding gene Chr1:170375236-170469383 (+)
PWK/PhJ MGP_PWKPhJ_G0015841
protein coding gene Chr1:163556638-163651262 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015627
protein coding gene Chr1:169138895-169242871 (+)
WSB/EiJ MGP_WSBEiJ_G0016117
protein coding gene Chr1:170474491-170566715 (+)



Homology
more
  • Human Ortholog
    FAM78B, family with sequence similarity 78 member B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM78B, family with sequence similarity 78 member B
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 149297
    neXtProt AC: NX_Q5VT40
    UniProt: Q5VT40

  • Chr Location
    1q24.1; chr1:166055918-166166755 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 226610 NCBI Gene Model | MGI Sequence Detail 89886 C57BL/6J ±  kb
transcript NM_001160262 RefSeq | MGI Sequence Detail 4986 C57BL/6  
polypeptide Q8BQN5 UniProt | EBI | MGI Sequence Detail 261 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 27

    Microarray probesets 3
Other
Accession IDs
less
MGI:1924716
References
more
  • Summaries
    All 20
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory