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Ttc16 Gene Detail
Summary
  • Symbol
    Ttc16
  • Name
    tetratricopeptide repeat domain 16
  • Synonyms
    1200002K10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443048
    NCBI Gene: 338348
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:32757026-32775633 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 22.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443048
protein coding gene Chr2:32757026-32775661 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025621
protein coding gene Chr2:31248955-31269122 (-)
A/J MGP_AJ_G0025598
protein coding gene Chr2:29913132-29932235 (-)
AKR/J MGP_AKRJ_G0025568
protein coding gene Chr2:30987105-31006827 (-)
BALB/cJ MGP_BALBcJ_G0025595
protein coding gene Chr2:30032244-30051161 (-)
C3H/HeJ MGP_C3HHeJ_G0025355
protein coding gene Chr2:30870650-30889038 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026039
protein coding gene Chr2:32185110-32207165 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023448
protein coding gene Chr2:28631615-28651856 (-)
CAST/EiJ MGP_CASTEiJ_G0024817
protein coding gene Chr2:30820530-30841542 (-)
CBA/J MGP_CBAJ_G0025333
protein coding gene Chr2:33418630-33439745 (-)
DBA/2J MGP_DBA2J_G0025466
protein coding gene Chr2:29675488-29694154 (-)
FVB/NJ MGP_FVBNJ_G0025428
protein coding gene Chr2:29562736-29582078 (-)
LP/J MGP_LPJ_G0025552
protein coding gene Chr2:31123045-31142483 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025459
protein coding gene Chr2:33037301-33056448 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026097
protein coding gene Chr2:30855525-30874980 (-)
PWK/PhJ MGP_PWKPhJ_G0024565
protein coding gene Chr2:29583565-29602454 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024365
protein coding gene Chr2:31015885-31034161 (-)
WSB/EiJ MGP_WSBEiJ_G0024886
protein coding gene Chr2:31043323-31063050 (-)



Homology
more
  • Human Ortholog
    TTC16, tetratricopeptide repeat domain 16
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TTC16, tetratricopeptide repeat domain 16
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 158248
    neXtProt AC: NX_Q8NEE8
    UniProt: Q8NEE8

  • Chr Location
    9q34.11; chr9:127716064-127731600 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039021 Ensembl Gene Model | MGI Sequence Detail 18608 C57BL/6J ±  kb
transcript ENSMUST00000161430 Ensembl | MGI Sequence Detail 2874 Not Applicable  
polypeptide ENSMUSP00000124031 Ensembl | MGI Sequence Detail 824 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory