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Rab11fip4 Gene Detail
Summary
  • Symbol
    Rab11fip4
  • Name
    RAB11 family interacting protein 4 (class II)
  • Synonyms
    A730072L08Rik, mKIAA1821, RAB11-FIP4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442920
    NCBI Gene: 268451
  • Gene Overview
    MyGene.info: RAB11FIP4
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:79591212-79698023 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.88 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    540 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442920
protein coding gene Chr11:79591021-79698023 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018801
protein coding gene Chr11:80701999-80816865 (+)
A/J MGP_AJ_G0018768
protein coding gene Chr11:77597383-77707055 (+)
AKR/J MGP_AKRJ_G0018738
protein coding gene Chr11:79922930-80039482 (+)
BALB/cJ MGP_BALBcJ_G0018741
protein coding gene Chr11:78005127-78112506 (+)
C3H/HeJ MGP_C3HHeJ_G0018555
protein coding gene Chr11:79984701-80097193 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019193
protein coding gene Chr11:83180723-83298905 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016827
protein coding gene Chr11:74544674-74651207 (+)
CAST/EiJ MGP_CASTEiJ_G0018110
protein coding gene Chr11:80453036-80563027 (+)
CBA/J MGP_CBAJ_G0018526
protein coding gene Chr11:86797507-86917885 (+)
DBA/2J MGP_DBA2J_G0018634
protein coding gene Chr11:77148463-77257553 (+)
FVB/NJ MGP_FVBNJ_G0018623
protein coding gene Chr11:76746808-76855215 (+)
LP/J MGP_LPJ_G0018704
protein coding gene Chr11:81212902-81326789 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018650
protein coding gene Chr11:87097047-87215792 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019233
protein coding gene Chr11:80185370-80296672 (+)
PWK/PhJ MGP_PWKPhJ_G0017880
protein coding gene Chr11:77965726-78076130 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017671
protein coding gene Chr11:79791919-79904526 (+)
WSB/EiJ MGP_WSBEiJ_G0018162
protein coding gene Chr11:80010027-80125060 (+)



Homology
more
  • Human Ortholog
    RAB11FIP4, RAB11 family interacting protein 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB11FIP4, RAB11 family interacting protein 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FIP4-Rab11, RAB11-FIP4
  • Links
    NCBI Gene ID: 84440
    neXtProt AC: NX_Q86YS3
    UniProt: Q86YS3

  • Chr Location
    17q11.2; chr17:31391624-31538217 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000017639 Ensembl Gene Model | MGI Sequence Detail 106812 C57BL/6J ±  kb
transcript ENSMUST00000017783 Ensembl | MGI Sequence Detail 7156 Not Applicable  
polypeptide ENSMUSP00000017783 Ensembl | MGI Sequence Detail 635 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 12
    Primer pair 3

    Microarray probesets 6
References
more
  • Summaries
    All 40
    Developmental Gene Expression 4
    Gene Ontology 6
    Phenotypes 14
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:237778 Hara Y, et al., ADP Ribosylation Factor 6 Regulates Neuronal Migration in the Developing Cerebral Cortex through FIP3/Arfophilin-1-dependent Endosomal Trafficking of N-cadherin. eNeuro. 2016 Jul-Aug;3(4)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory