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Tmcc3 Gene Detail
Summary
  • Symbol
    Tmcc3
  • Name
    transmembrane and coiled coil domains 3
  • Synonyms
    C630016B22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442900
    NCBI Gene: 319880
Location & Maps
more
  • Sequence Map
    Chr10:94311949-94590956 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      279008 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 48.88 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TMCC3, transmembrane and coiled-coil domain family 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TMCC3, transmembrane and coiled-coil domain family 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 57458
    neXtProt AC: NX_Q9ULS5

  • Chr Location
    12q22; chr12:94567124-94650562 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    19
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    14
  • Targeted
    2
  • Transposon induced
    1
  • Genomic Mutations
    2 involving Tmcc3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031011 VEGA Gene Model | MGI Sequence Detail 279008 C57BL/6J ±  kb
transcript OTTMUST00000076804 VEGA | MGI Sequence Detail 5530 Not Applicable  
polypeptide OTTMUSP00000040488 VEGA | MGI Sequence Detail 477 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    2046 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000030359 transmembrane and coiled-coil domains protein 3
  • InterPro Domains
    IPR019394 Testis-specific protein TEX28/transmembrane and coiled-coil domains protein
Molecular
Reagents
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  • All nucleic 69
    cDNA 69

    Microarray probesets 9
Other
Accession IDs
less
MGI:2143840, MGI:2143949
References
more
  • Summaries
    All 29
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory