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Cobll1 Gene Detail
Summary
  • Symbol
    Cobll1
  • Name
    Cobl-like 1
  • Synonyms
    Coblr1, D430044D16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442894
    NCBI Gene: 319876
  • Gene Overview
    MyGene.info: COBLL1
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:65088339-65239403 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 38.35 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1195 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442894
protein coding gene Chr2:65088339-65239481 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025777
protein coding gene Chr2:64870662-65029401 (-)
A/J MGP_AJ_G0025753
protein coding gene Chr2:62381781-62532325 (-)
AKR/J MGP_AKRJ_G0025723
protein coding gene Chr2:64048779-64200018 (-)
BALB/cJ MGP_BALBcJ_G0025748
protein coding gene Chr2:62527908-62679966 (-)
C3H/HeJ MGP_C3HHeJ_G0025509
protein coding gene Chr2:64206627-64367793 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026195
protein coding gene Chr2:66778173-66949620 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023599
protein coding gene Chr2:59745411-59900575 (-)
CAST/EiJ MGP_CASTEiJ_G0024973
protein coding gene Chr2:64250140-64414290 (-)
CBA/J MGP_CBAJ_G0025489
protein coding gene Chr2:69326187-69483125 (-)
DBA/2J MGP_DBA2J_G0025620
protein coding gene Chr2:62003276-62154770 (-)
FVB/NJ MGP_FVBNJ_G0025582
protein coding gene Chr2:61424781-61576569 (-)
LP/J MGP_LPJ_G0025708
protein coding gene Chr2:64689112-64845990 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025613
protein coding gene Chr2:71264235-71429276 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026252
protein coding gene Chr2:64104440-64257381 (-)
PWK/PhJ MGP_PWKPhJ_G0024714
protein coding gene Chr2:61822249-61976342 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024521
protein coding gene Chr2:64246566-64418866 (-)
WSB/EiJ MGP_WSBEiJ_G0025041
protein coding gene Chr2:64461988-64620947 (-)



Homology
more
  • Human Ortholog
    COBLL1, cordon-bleu WH2 repeat protein like 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    COBLL1, cordon-bleu WH2 repeat protein like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    COBLR1
  • Links
    NCBI Gene ID: 22837
    neXtProt AC: NX_Q53SF7
    UniProt: Q53SF7

  • Chr Location
    2q24.3; chr2:164680185-164842168 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034903 Ensembl Gene Model | MGI Sequence Detail 151065 C57BL/6J ±  kb
transcript ENSMUST00000112431 Ensembl | MGI Sequence Detail 5024 Not Applicable  
polypeptide ENSMUSP00000108050 Ensembl | MGI Sequence Detail 1241 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR019025 Cordon-bleu, ubiquitin-like domain
Molecular
Reagents
less
  • All nucleic 82
    cDNA 81
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1917072
References
more
  • Summaries
    All 22
    Developmental Gene Expression 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:226028 Lewandowski JP, et al., Spatiotemporal regulation of GLI target genes in the mammalian limb bud. Dev Biol. 2015 Oct 1;406(1):92-103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory