Plxna4os1 MGI Mouse Gene Detail - MGI:2442851 - plexin A4, opposite strand 1

Sequence Map

Chr6:32488076-32492511 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2442851	antisense lncRNA gene	Chr6:32488008-32492511 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004247	antisense lncRNA gene	Chr6:30511544-30516047 (+)
A/J	MGP_AJ_G0004225	antisense lncRNA gene	Chr6:29193515-29198018 (+)
AKR/J	MGP_AKRJ_G0004206	antisense lncRNA gene	Chr6:30180815-30185318 (+)
BALB/cJ	MGP_BALBcJ_G0004212	antisense lncRNA gene	Chr6:29321817-29326320 (+)
C3H/HeJ	MGP_C3HHeJ_G0004160	antisense lncRNA gene	Chr6:30163214-30167717 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004361	antisense lncRNA gene	Chr6:31308285-31312788 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003834	antisense lncRNA gene	Chr6:27340285-27344750 (+)
CAST/EiJ	MGP_CASTEiJ_G0004122	antisense lncRNA gene	Chr6:29957632-29962144 (+)
CBA/J	MGP_CBAJ_G0004154	antisense lncRNA gene	Chr6:32503232-32507735 (+)
DBA/2J	MGP_DBA2J_G0004170	antisense lncRNA gene	Chr6:29092560-29097063 (+)
FVB/NJ	MGP_FVBNJ_G0004186	antisense lncRNA gene	Chr6:28888825-28893354 (+)
LP/J	MGP_LPJ_G0004248	antisense lncRNA gene	Chr6:30660264-30664767 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004176	antisense lncRNA gene	Chr6:34870912-34875415 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004358	antisense lncRNA gene	Chr6:30056255-30060758 (+)
PWK/PhJ	MGP_PWKPhJ_G0004075	antisense lncRNA gene	Chr6:28682632-28687164 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004019	antisense lncRNA gene	Chr6:29757118-29761648 (+)
WSB/EiJ	MGP_WSBEiJ_G0004158	antisense lncRNA gene	Chr6:29984287-29988790 (+)

less

less

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

less

Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

less

Representative Sequences				Length	Strain/Species	Flank
	genomic	319849	NCBI Gene Model \| MGI Sequence Detail	4436	C57BL/6J	± kb
	transcript	NR_040277	RefSeq \| MGI Sequence Detail	1909	C57BL/6

less

Summaries

All 10
Earliest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for Plxna4os1:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/09/2024 MGI 6.23