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Tmem52b Gene Detail
Summary
  • Symbol
    Tmem52b
  • Name
    transmembrane protein 52B
  • Synonyms
    D630042F21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442838
    NCBI Gene: 330428
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:129489518-129496190 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.37 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442838
 protein coding gene Chr6:129489512-129496190 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031350
 protein coding gene Chr6:133181556-133186031 (+)
A/J MGP_AJ_G0031321
 protein coding gene Chr6:128087323-128094119 (+)
AKR/J MGP_AKRJ_G0031249
 protein coding gene Chr6:131582835-131589517 (+)
BALB/cJ MGP_BALBcJ_G0031328
 protein coding gene Chr6:127731170-127737852 (+)
C3H/HeJ MGP_C3HHeJ_G0031052
 protein coding gene Chr6:131780695-131787361 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031787
 protein coding gene Chr6:136679895-136684388 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028933
 protein coding gene Chr6:126408317-126413901 (+)
CAST/EiJ MGP_CASTEiJ_G0030430
 protein coding gene Chr6:132012670-132019816 (+)
CBA/J MGP_CBAJ_G0031012
 protein coding gene Chr6:142063112-142069797 (+)
DBA/2J MGP_DBA2J_G0031169
 protein coding gene Chr6:127043595-127050276 (+)
FVB/NJ MGP_FVBNJ_G0031119
 protein coding gene Chr6:125925298-125931945 (+)
LP/J MGP_LPJ_G0031249
 protein coding gene Chr6:133401140-133407812 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031157
 protein coding gene Chr6:145912752-145917246 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031820
 protein coding gene Chr6:131655479-131662540 (+)
PWK/PhJ MGP_PWKPhJ_G0030148
 protein coding gene Chr6:125322233-125329068 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029977
 protein coding gene Chr6:129675246-129679738 (+)
WSB/EiJ MGP_WSBEiJ_G0030518
 protein coding gene Chr6:132082325-132089016 (+)



Homology
more
  • Human Ortholog
    TMEM52B, transmembrane protein 52B
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM52B, transmembrane protein 52B
  • Synonyms
    C12orf59
  • Links
    NCBI Gene ID: 120939
    neXtProt AC: NX_Q4KMG9
    UniProt: Q4KMG9

  • Chr Location
    12p13.2; chr12:10170513-10191804 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    1
  • cDNA Data
    29
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030160 Ensembl Gene Model | MGI Sequence Detail 6673 C57BL/6J ±  kb
transcript ENSMUST00000032263 Ensembl | MGI Sequence Detail 2877 Not Applicable  
polypeptide ENSMUSP00000032263 Ensembl | MGI Sequence Detail 186 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory