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Ifi208 Gene Detail
Summary
  • Symbol
    Ifi208
  • Name
    interferon activated gene 208
  • Synonyms
    E430029J22Rik, Pydc3, Pyr-rv1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442822
    NCBI Gene: 100033459
  • Gene Overview
    MyGene.info: IFI16
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:173673675-173698395 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 80.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    568 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442822
protein coding gene Chr1:173673628-173698395 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0016789
protein coding gene Chr1:172063416-172078297 (-)
AKR/J MGP_AKRJ_G0016757
protein coding gene Chr1:177531765-177576823 (+)
BALB/cJ MGP_BALBcJ_G0016750
protein coding gene Chr1:172898568-172916943 (+)
C3H/HeJ MGP_C3HHeJ_G0016574
protein coding gene Chr1:178161739-178205281 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017212
protein coding gene Chr1:185422075-185567291 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014917
protein coding gene Chr1:163925757-163937238 (-)
CAST/EiJ MGP_CASTEiJ_G0016152
protein coding gene Chr1:177224766-177233961 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0016655
protein coding gene Chr1:171286888-171345720 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0016724
protein coding gene Chr1:180619401-180629012 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016677
protein coding gene Chr1:199221581-199253588 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017247
protein coding gene Chr1:177194275-177201180 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    IFI16, interferon gamma inducible protein 16
  • Vertebrate Orthologs
    16
  • Human Ortholog
    IFI16, interferon gamma inducible protein 16
    Orthology source: HomoloGene
  • Synonyms
    IFNGIP1, PYHIN2
  • Links
    NCBI Gene ID: 3428
    neXtProt AC: NX_Q16666
    UniProt: Q16666

  • Chr Location
    1q23.1; chr1:158999968-159055155 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    44 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066677 Ensembl Gene Model | MGI Sequence Detail 24721 C57BL/6J ±  kb
transcript ENSMUST00000169857 Ensembl | MGI Sequence Detail 1767 Not Applicable  
polypeptide ENSMUSP00000128958 Ensembl | MGI Sequence Detail 588 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 1
Other
Accession IDs
less
MGI:3796068
References
more
  • Summaries
    All 62
    Gene Ontology 2
    Phenotypes 44
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:258147 Zuo H, et al., Age-Dependent Decline in Fate Switch from NG2 Cells to Astrocytes After Olig2 Deletion. J Neurosci. 2018 Feb 28;38(9):2359-2371

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory